DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS17 and Mrps17

DIOPT Version :10

Sequence 1:NP_525119.1 Gene:mRpS17 / 37872 FlyBaseID:FBgn0034986 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001099393.1 Gene:Mrps17 / 288621 RGDID:1307650 Length:127 Species:Rattus norvegicus


Alignment Length:95 Identity:32/95 - (33%)
Similarity:53/95 - (55%) Gaps:0/95 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LMGQCMPCIKQNASKIRIRRMELDKNLNMYFKKDEFYFAHDPQKVCKTGDVVLIRELPERLTRLI 72
            ::|:.:.......:|:|..|:.||..|..||.|.:.|||||..:.|..||:||:|.||....:.:
  Rat    13 VVGKVIGTAMVKTAKVRATRLVLDPYLLKYFNKRKTYFAHDALQQCSVGDIVLLRALPVPRAKHV 77

  Fly    73 THNVEKVVYPLGDITDPLTGKKVVVGNYRE 102
            .|.:.::::.:|.:.||:|||......|.|
  Rat    78 KHELAEIIFKVGRVIDPVTGKPCAGTAYLE 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS17NP_525119.1 Ribosomal_uS17 <22..79 CDD:466775 23/56 (41%)
Mrps17NP_001099393.1 Ribosomal_uS17 11..84 CDD:466775 24/70 (34%)

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