DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS17 and rps-11

DIOPT Version :10

Sequence 1:NP_525119.1 Gene:mRpS17 / 37872 FlyBaseID:FBgn0034986 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_502186.1 Gene:rps-11 / 178083 WormBaseID:WBGene00004480 Length:155 Species:Caenorhabditis elegans


Alignment Length:86 Identity:24/86 - (27%)
Similarity:37/86 - (43%) Gaps:19/86 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RGLLLMGQCMPCIKQNASK-IRIRR--MELDKNLNMYFKKDEFYFAHDPQKVCK-------TGDV 58
            ||::|.|   ..:|...:: |.:||  :...|....|.|:.:...||     |.       .||:
 Worm    66 RGMILTG---VVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAH-----CSPAFRDIHPGDL 122

  Fly    59 VLIRELPERLTRLITHNVEKV 79
            |.|.|. ..|::.:..||.||
 Worm   123 VTIGEC-RPLSKTVRFNVLKV 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS17NP_525119.1 Ribosomal_uS17 <22..79 CDD:466775 17/66 (26%)
rps-11NP_502186.1 PTZ00241 1..155 CDD:240326 24/86 (28%)

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