DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3328 and Myrfl

DIOPT Version :10

Sequence 1:NP_611893.3 Gene:CG3328 / 37871 FlyBaseID:FBgn0034985 Length:1423 Species:Drosophila melanogaster
Sequence 2:NP_001028505.1 Gene:Myrfl / 237558 MGIID:2685085 Length:904 Species:Mus musculus


Alignment Length:744 Identity:270/744 - (36%)
Similarity:369/744 - (49%) Gaps:154/744 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 ATGSYQN--LSTCTLTSALG----LGDRVQVIGTSQLSLNRVSAPSTPVHSLSRKRKMSTQLDCP 284
            |:|:.:|  |.|..|...||    ||           :|.| ..|.||.:|.|..|         
Mouse    19 ASGTLENPALDTSLLEEFLGNDFDLG-----------ALQR-QLPDTPPYSASDPR--------- 62

  Fly   285 EFPSAPKVDAGLQMSPL-------RASHHSLATPTPAPSH------------------------- 317
               |.|:|......:|.       .|..||...|.|.|.|                         
Mouse    63 ---SPPQVKGACCRTPRPPAGRIPAAFLHSTTAPGPLPEHPSQSMAGQTHSSFQNGYPESSHPAT 124

  Fly   318 -------------CS-----------ASVSPALSAVNSQ-ADNSLDGQPGG-----VVTGSGSGS 352
                         ||           :|:.|.....:|| .::|.|.....     :.|.|.|..
Mouse   125 CRHQTGPSRLGTSCSFHQQPLCHVPGSSLPPTKKRKHSQIQEDSWDCSSWAHYFRPMTTRSQSIE 189

  Fly   353 GSGSGSGSEAGDPAGGQC---IRFNAFQPENWHKLFDQSLQELSVIYYRVDADKGFNFSVSDDAY 414
            ..........|.|. .||   :::..:|...||.|.:...::|..:.|:|..||||.||..|:|:
Mouse   190 VQDHDREGRNGMPV-DQCSPALKWQPYQSVPWHSLLNSRYEKLPEVGYQVVTDKGFTFSPVDEAF 253

  Fly   415 VCQKKNHFQVTCHARLQGDAKFVKTPSGFEKIKSFHLHFYGVKFEAPNQTIRVEQSQSDRSKKAF 479
            |||||||||:|.|.::.|..|||||..|.:.|:.|:|..:|:|.||.||.|.:||||:|||||.|
Mouse   254 VCQKKNHFQITVHIQVWGSPKFVKTQVGLKPIEKFYLKAFGIKVEATNQVIAIEQSQADRSKKTF 318

  Fly   480 HPVPIDLQKHIVSKITVGRLHFSETTNNNMRKKGRPNPEQRFFQLVVGLHVHTISGNFPVVSHGS 544
            .||.|||....|:|:|:|||||||||.|||||||:|||:||:|.|||||:.......:.:.:|.|
Mouse   319 DPVKIDLLTDQVTKVTLGRLHFSETTANNMRKKGKPNPDQRYFMLVVGLYAANQDQFYLLAAHIS 383

  Fly   545 EKIIVRASNPGQFESDVDLCWQRGLTPESVFHTGRVGINTDRPDESLVVHGNLKVSGHIVQPSDS 609
            |:||||||||||||:|.|..||||..|||:...||||||||.|||:|||.||:||.|.::.||||
Mouse   384 ERIIVRASNPGQFENDSDALWQRGQVPESIVCHGRVGINTDTPDEALVVCGNMKVMGTVMHPSDS 448

  Fly   610 RAKQEIGELDTSVQLRNLQKIRIVRYRYMPEFAVHSGLRRESDTREIEDTGVIAQEVREVIPDAV 674
            |.|:.|.|:||:.|||.:.::|||:|.|.||||...|:      .....||:|||||:|::|.||
Mouse   449 RVKENIQEVDTNEQLRRIAQMRIVQYDYKPEFASAMGI------NTAHQTGMIAQEVQEILPRAV 507

  Fly   675 QEAGSVVLPNGNVIEKFLLVNKDRILMENIGAVKELCKVTCSLETRIEHLE-----RANIGQNSQ 734
            :|.|.|...||..:|.||:|:||:|.|||:||||:|||:|.:||.|||.||     .|.:.:.|.
Mouse   508 REVGDVTGGNGETLENFLMVDKDQIFMENVGAVKQLCKLTNNLEERIEELEIWNKKLARLKRLSS 572

  Fly   735 QLRAKDLLEPRCILPERAAITSYGSRRDG------------YEVCSSRSLQIVIFLLIIVMAACL 787
            ..:: .:.|...|.....|:::..:||.|            .:.|.:...|.::.:||.|||.|.
Mouse   573 SWKS-SISEASSISKLSRAVSASSARRTGSKKPTKVSFSGRKQSCPNWVFQTLVVVLIAVMAFCA 636

  Fly   788 AAVSTLYFVEHNKQQQADGFFGAGMFRQEAGPTHLSDEERHYFHNLHTLFKNKTHGPWPMRQMYA 852
            ..:..||.:.                        |.|::|   .:.:....|.|..|.|     |
Mouse   637 LTIVALYILS------------------------LKDQDR---RSPNLPLSNMTSSPEP-----A 669

  Fly   853 TSTSRPPGSRQAEEEAEDLAAVLTKPQVS 881
            .|::.|..:.....|....:  |..|:::
Mouse   670 LSSTAPTSAPHTTPETTQTS--LQVPEIT 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3328NP_611893.3 NDT80_PhoG 413..560 CDD:398753 89/146 (61%)
Peptidase_S74_CIMCD 607..729 CDD:381748 64/126 (51%)
MyrflNP_001028505.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..132 19/98 (19%)
NDT80_PhoG 252..399 CDD:398753 89/146 (61%)
Peptidase_S74_CIMCD 446..547 CDD:418048 55/106 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 656..688 8/36 (22%)
MRF_C2 765..903 CDD:464020
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.