DRSC/TRiP Functional Genomics Resources

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Protein Alignment speck and R05H10.1

DIOPT Version :10

Sequence 1:NP_995934.1 Gene:speck / 37867 FlyBaseID:FBgn0287831 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_497076.1 Gene:R05H10.1 / 175144 WormBaseID:WBGene00011042 Length:250 Species:Caenorhabditis elegans


Alignment Length:190 Identity:40/190 - (21%)
Similarity:80/190 - (42%) Gaps:23/190 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 YTIELIQPEDGEAVIAMLKTFFFKDEP--------LNTFLDLGECKELEKYSLKPLPDNCSYKAV 113
            |.....:..|.:.::..|...|:.:||        |..:|.:  ..|:...||| ||  .|....
 Worm     5 YIYRTAEKSDFDRILKFLAEHFYHEEPSIRASKIALEEWLPI--FGEMTTSSLK-LP--ISTVVT 64

  Fly   114 NKKGE-IIGVFLNGLMRRPSPDDVPEKAADSCEH------PKFKKILSLMDHVEEQFNIFDVYP- 170
            .:.|| |:.|.||.:..|...::..:......:|      ...::.::::....::|  :::.| 
 Worm    65 TEDGENIVAVLLNSMWSREEDEERMKHGNGKGDHDTSGYSEALQRFMTIVQKCHDEF--WNLAPS 127

  Fly   171 DEELILDGKILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHVLCSSHYSARVMEKLGF 230
            |..|::..:|.||...::..|||.::..|.....|.:.::......||..:..::.|.||
 Worm   128 DVNLVVYREISSVGKPWQRQGIATKMLSRNMSAARLHNVDGIVSATSSFANQTLLAKNGF 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
speckNP_995934.1 RimI 181..250 CDD:440224 12/50 (24%)
R05H10.1NP_497076.1 None

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