DRSC/TRiP Functional Genomics Resources

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Protein Alignment tamo and Spata2

DIOPT Version :10

Sequence 1:NP_611889.1 Gene:tamo / 37864 FlyBaseID:FBgn0041582 Length:797 Species:Drosophila melanogaster
Sequence 2:NP_446127.3 Gene:Spata2 / 114210 RGDID:620754 Length:511 Species:Rattus norvegicus


Alignment Length:586 Identity:127/586 - (21%)
Similarity:194/586 - (33%) Gaps:149/586 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DEILRRHWMFLETEESIEKLEERKQLEGCLKEFLCV----------VQHDRKFFLPETGHVLRRS 69
            |::.|::..|.|     .|::.....:....|:|.|          |....:|.|.:...|:..|
  Rat     7 DDLFRKYVQFHE-----GKVDTTPGKQSGSDEYLRVAAATLLSLHKVDPLYRFRLIQFYEVVESS 66

  Fly    70 VLELPDFSAQNAIVAFETISQYANNLFTKPWRKEYRTLKTYSGCFQHDIQSRLL--DAEQLFLAM 132
            :..|...|......||..:...|.|||..||:||:|::|||:|.|.:.::|.||  |...:...|
  Rat    67 LRSLSSSSLSALHCAFSMLETMAINLFLFPWKKEFRSIKTYTGPFVYYVKSTLLEKDIRAILKFM 131

  Fly   133 GYRRAAEDTFVLEGPICPDQVTNVSRDAMAAYVECQIMKHIYAGVTAAGYVCTWKDILQFRERYV 197
            ||.......:.|:..:...||..||.:...|.|||:.|..|::.|...||               
  Rat   132 GYEPELGTAYKLKELVESLQVKMVSFELFLAKVECEQMLGIHSQVKDKGY--------------- 181

  Fly   198 GGTSTTIKEMVRQLSEKRVRMEQPPMQENTYSNVVSAAPTACGMRSNNVAHHPSSSGTCALHPNG 262
                          ||..|..|:....|:     ......|...|:.:..|..:|....||..:.
  Rat   182 --------------SELDVVTERKSSTED-----ARGCSDALRRRAESREHLTTSMARVALQKSA 227

  Fly   263 LNEAGK-YLPPYPAPPPQQPHLPGPLMTHSRSLDHY------QEPQAHLPHRHSFDQQLQQQCQL 320
            ...|.| |..|....|             |||:|.|      ::|    |.:.|...:.:     
  Rat   228 SERAAKDYYKPRVTKP-------------SRSVDAYDSYWESRKP----PSKASLSLRKE----- 270

  Fly   321 PHVYEAPYDCLDGLSMGSSASYAAVTGAYNAPGNRYPL-PYNISSQLNAPY---ASPADFYGNGQ 381
            |...:...|..|.:...|.:.....:..:.:|.:...: |.|....|.:.|   ....|.|.:.:
  Rat   271 PLAMDVGEDLKDEIIRPSPSLLTMSSSPHGSPDDLPSISPINGLGLLRSTYFPTQDDVDLYTDSE 335

  Fly   382 HTNMYAT---------LGKTGPAHSCDLHRRQPNTSAAA---------AAALAAMQHRQSTYPPD 428
            ....|..         |.| ..|||. .|:|.|.|..:|         :.:.:..|...|..|..
  Rat   336 PRATYRRQDALRSDIWLVK-NDAHSI-YHKRSPPTKESALSKCQNCGLSCSSSLCQRCDSVCPSA 398

  Fly   429 HHLIDFDERAHLTQHDFGTHDYDPQYAELRGQVQPSMRGNPVAMYATYGGYDLPTTLPQAPPPTG 493
            .....|..:|  :.||...|. .|...:..||.|               |.|...|:...|.|: 
  Rat   399 SKPSGFPSKA--SAHDSLVHG-APMREKYVGQTQ---------------GLDRLATVHSKPKPS- 444

  Fly   494 QDMYIYARPVPKSSRMRALAEAGGINST-----------------DKHPRSAEKQSTMDNNRKMH 541
                     ...:||......||..|:.                 |...|.:|....|.||:..:
  Rat   445 ---------TTATSRCGFCNRAGATNTCTQCSKVSCDPCLGAYHYDPCCRKSELHKFMPNNQLNY 500

  Fly   542 K 542
            |
  Rat   501 K 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tamoNP_611889.1 PUB 75..158 CDD:198416 28/84 (33%)
ZnF_RBZ 740..764 CDD:197784
RanBP2-type Zn finger 742..761 CDD:275376
Spata2NP_446127.3 PIM motif. /evidence=ECO:0000250|UniProtKB:Q9UM82 320..337 3/16 (19%)
Bbox1 451..494 CDD:380815 6/42 (14%)
Blue background indicates that the domain is not in the aligned region.

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