DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tamo and spata2

DIOPT Version :10

Sequence 1:NP_611889.1 Gene:tamo / 37864 FlyBaseID:FBgn0041582 Length:797 Species:Drosophila melanogaster
Sequence 2:XP_002933200.1 Gene:spata2 / 100380171 XenbaseID:XB-GENE-1000068 Length:519 Species:Xenopus tropicalis


Alignment Length:553 Identity:110/553 - (19%)
Similarity:191/553 - (34%) Gaps:175/553 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DLWDEILRRHWMFLETEESIEKLEERKQLEGCLKEFLCVVQHD--RKFFLPETGHVLRRSVLELP 74
            ||:.:.::.|...|:..::.::....:.|......||.:.:.|  .:|.|.:...|...|:..|.
 Frog     8 DLFRKYVQYHEAKLDASDNKQRTVSDEYLRTAASAFLSLPKVDPLYRFRLIKFYEVCENSLKSLV 72

  Fly    75 DF---SAQNAIVAFETISQYANNLFTKPWRKEYRTLKTYSGCFQHDIQSRLLDAE--QLFLAMGY 134
            ..   |..||....|||   ..|||..||:|||:::|||:|.|.:.:::.|.|.:  .:...|||
 Frog    73 TSNLRSLHNAAAMLETI---GINLFLYPWKKEYKSIKTYTGPFVYFVRAALTDDDIRHILHNMGY 134

  Fly   135 RRAAEDTFVLEGPICPDQVTNVSRDAMAAYVECQIMKHIYAGVTAAGYVCTWKDILQFR------ 193
            .:.....:.|:..:...||..|:.:...|.|||:::..||..|...||:..  |::..|      
 Frog   135 IQELGTVYRLKDHVDTTQVKRVAFELFLARVECELLLEIYLQVKDRGYLEV--DVVNERRSSNED 197

  Fly   194 --------ERYVGGTSTTIKEMVRQLSEK---------RVRMEQPPMQENTYSN----------- 230
                    :|......|:|..::.|.|..         :.::.:|....:||.|           
 Frog   198 VRGCTDEMKRRAECKETSIARILLQKSASERAPSKDYFKPKVTKPSKSVDTYDNYWDSKNKPPLM 262

  Fly   231 ------------------------------VVSAAPTACGMRSNNVAHHPSSSGTCALHPNGL-- 263
                                          .:|::|..|.....|::.          :|||:  
 Frog   263 PSLSLRKEPILVDADDDLKDEIIRPSPSLLTMSSSPHGCSDEFLNLSS----------NPNGVLR 317

  Fly   264 -NEAGKYLPP------YPAPPPQQPHLP----------------GPLMTHSRSLDHYQEPQAHLP 305
             |:...|.|.      |..|..:..::.                .||. |.||         ||.
 Frog   318 TNQTYGYYPSEDEVDLYTDPDTRMLNIKRQDFAKPDVWLLKNEMNPLY-HKRS---------HLA 372

  Fly   306 HRHSFDQ----------QLQQQCQLPHVY--EAPYDCLDGLSM---GSSASYAAVTGAYNAPGNR 355
            ...:|.:          .:.|:|....::  :.|......||:   |.:.||:      :.|..|
 Frog   373 KETAFMKCQSCGVSCGGPVCQKCDNVLIFRPDVPSHKQSSLSIKTTGQNDSYS------SGPVLR 431

  Fly   356 YPLPYNISSQLNA----PYASPADF----YGNGQHTNMYATLGKTGPAHSC-------------D 399
            ....|.:|||..|    |...|:..    :.|.|..:...|:......::|             |
 Frog   432 EKSSYGLSSQERASQQNPKMKPSSTLRCGFCNRQGASNTCTVCSKVSCNNCITAYCREYCCRKSD 496

  Fly   400 LHRRQPNTSAAAAAALAAMQHRQSTYPPDHHLI 432
            .|:..||..         :.::.|..|   ||:
 Frog   497 FHKFAPNNQ---------LNYKSSQLP---HLV 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tamoNP_611889.1 PUB 75..158 CDD:198416 28/87 (32%)
ZnF_RBZ 740..764 CDD:197784
RanBP2-type Zn finger 742..761 CDD:275376
spata2XP_002933200.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.