DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43775 and r3hdml

DIOPT Version :9

Sequence 1:NP_726425.3 Gene:CG43775 / 37863 FlyBaseID:FBgn0264297 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001373427.1 Gene:r3hdml / 561976 ZFINID:ZDB-GENE-090313-275 Length:252 Species:Danio rerio


Alignment Length:219 Identity:45/219 - (20%)
Similarity:78/219 - (35%) Gaps:82/219 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TLKVR-------KDTLAVLNTFRDMLAGGELDTAENKTFPSAKRMRALQWDSELAYMARTHAATV 119
            |.:||       ||..|:|:..         :...::.||.|..|..:.||..||..|       
Zfish    52 TFRVRRRRFISGKDMTALLDYH---------NRVRSQVFPPAANMEYMVWDERLAKSA------- 100

  Fly   120 SFMHSECRSTLRFPLAGEVLALSP-----PVGHRLSLTELLRMVFAHIFDEYKTVQD-PQSFARR 178
            .|..|:|           :....|     .:|..||:          |...||::.| .:|:   
Zfish   101 EFWASQC-----------IWEHGPHHFLQHIGQNLSI----------ISGRYKSIIDLVKSW--- 141

  Fly   179 FDSKRDYS---------VGHFSIIVNDRVSRVGCG-------FAVGSNCEKDGKVGFCHFLTCHF 227
            :|.:..:|         ..|::.:|....:::||.       |..||..::      ...|.|::
Zfish   142 YDERHSFSYPSRCSGSVCTHYTQMVWAASNKIGCAIKKCSDIFVFGSMWKQ------ATLLVCNY 200

  Fly   228 DYTNVNGSYV----YKTGKATTGC 247
               .:.|::|    ||.|:..:.|
Zfish   201 ---AIKGNWVGEAPYKIGRPCSAC 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43775NP_726425.3 SCP_euk 66..228 CDD:240180 37/190 (19%)
r3hdmlNP_001373427.1 CAP_R3HDML 66..201 CDD:349409 34/183 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585753
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.850

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