DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43775 and Clec18a

DIOPT Version :10

Sequence 1:NP_726425.3 Gene:CG43775 / 37863 FlyBaseID:FBgn0264297 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_038954172.1 Gene:Clec18a / 307851 RGDID:1559899 Length:497 Species:Rattus norvegicus


Alignment Length:234 Identity:53/234 - (22%)
Similarity:86/234 - (36%) Gaps:75/234 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GLLLLLLPMVAGYNYCNNRTHVCDLAQRKHFMCRLGELKPYGGRAKYYASIPDTLKV-----RKD 68
            ||||||||:: |..:.                    |::|        ..:|..:.:     ||:
  Rat    39 GLLLLLLPLL-GITWT--------------------EVQP--------PQLPKQVPIVQALSRKE 74

  Fly    69 TLAVLNTFRDMLAGGELDTAENKTFPSAKRMRALQWDSELAYMARTHAATVSFMHSECRSTLRFP 133
            :..:|.|...:         .::..|||..|:.:.|...||.:|:..||.       | .|...|
  Rat    75 SFLILTTHNRL---------RSQVHPSAANMQRMDWSESLAQLAQARAAL-------C-GTSATP 122

  Fly   134 LAGEVLALSPPVGHRLSLTELLRMVFAHIFDEYKTVQDPQSFARRFDS---KRDYSVGHFSIIVN 195
            .....|..:|.||..:   :||.|..|. |.|...|...:....|..|   ..:.:..|::.:|.
  Rat   123 NLAATLRNTPDVGWNV---QLLPMGSAS-FVEVVNVWFAEGLQYRHGSAECAHNATCAHYTQLVW 183

  Fly   196 DRVSRVGCG-----------------FAVGSNCEKDGKV 217
            ...|::|||                 ::.|.|.|.:||:
  Rat   184 ATSSQLGCGWQPCFVDQVATEAFVCAYSPGGNWEINGKM 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43775NP_726425.3 CAP_euk 66..228 CDD:349399 41/172 (24%)
Clec18aXP_038954172.1 CAP_euk 77..211 CDD:349399 34/154 (22%)
CLECT 361..485 CDD:153057
Blue background indicates that the domain is not in the aligned region.

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