DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43775 and scl-6

DIOPT Version :9

Sequence 1:NP_726425.3 Gene:CG43775 / 37863 FlyBaseID:FBgn0264297 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:195 Identity:55/195 - (28%)
Similarity:74/195 - (37%) Gaps:53/195 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 NTFRDMLAGGELDTAENKTF-PSAKRMRALQWDSELAYMARTHAATVSFMHSECRSTLRFPLAGE 137
            |:||..||.|....  |.|. |:...:|.:.|||.||..|:|:|.|.....|..:.|      ||
 Worm    33 NSFRSKLATGTYSI--NGTLKPAGSNIRKMSWDSTLATSAQTYANTCPTGFSNTQGT------GE 89

  Fly   138 VLALSPPVGHRLSLTELLRMVFAHI--FDEY---KTVQDPQSF-----ARRFDSKR--DYSVGHF 190
            .|              ..|...|:|  .|.|   .:|...|.|     |..:.|:.  |..||:.
 Worm    90 NL--------------YWRTTSANISGLDIYGGAASVSWEQEFQKYGWATNYFSQELFDTGVGNG 140

  Fly   191 SIIVNDRVSRVGCGFAVGSNCEKD----GKVGFCHFLTCHFDYTNVNGSYV----YKTGKATTGC 247
            :.:...:.:.||||.   .||.||    .||.    :.||:   ...|.||    |..|...:.|
 Worm   141 TQMAWAKTNLVGCGV---KNCGKDSTGLNKVA----VVCHY---KPLGRYVDQMIYTAGFTCSQC 195

  Fly   248  247
             Worm   196  195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43775NP_726425.3 SCP_euk 66..228 CDD:240180 49/170 (29%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 49/174 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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