DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43775 and LOC101883528

DIOPT Version :9

Sequence 1:NP_726425.3 Gene:CG43775 / 37863 FlyBaseID:FBgn0264297 Length:272 Species:Drosophila melanogaster
Sequence 2:XP_005162473.1 Gene:LOC101883528 / 101883528 -ID:- Length:261 Species:Danio rerio


Alignment Length:224 Identity:49/224 - (21%)
Similarity:81/224 - (36%) Gaps:76/224 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LAGGELDTAE------------NKTFPSAKRMRALQWDSELAYMARTHAATVSFMHSECRSTLRF 132
            ||.|:|...|            ::..|||..|:.:.||..:..:|..:||...:.|         
Zfish    18 LAVGQLTEQEILNIVDLHNELRSQVQPSAAFMQKVVWDETIRLVAEGYAAKCIWDH--------- 73

  Fly   133 PLAGEVLALSPPVGHRLSLTELLRMVFAHIFDEYKTVQDPQSFARRFDSKRDYS----------- 186
                     :|.:.| |::.|.| .|....|:..|.|.|      .|:...||:           
Zfish    74 ---------NPDLEH-LTMGENL-FVGTGPFNATKAVMD------WFNENLDYNYNTNDCAEDKM 121

  Fly   187 VGHFSIIVNDRVSRVGCGFAVGSNCEKDGKVGFCHF-----LTC-HFDYTNVNGSYVYKTGKATT 245
            .||::.:|....:::||........||      .||     |.| ::...|:.|...|::|::.:
Zfish   122 CGHYTQLVWANTTKIGCASYFCDTLEK------LHFEKATLLICDYYPQGNIEGQKPYESGESCS 180

  Fly   246 GCNDWKTIASIKYSNLCENT----GEIFP 270
            .|.:           .|||.    ..:||
Zfish   181 KCPE-----------ECENNICVMENLFP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43775NP_726425.3 SCP_euk 66..228 CDD:240180 39/176 (22%)
LOC101883528XP_005162473.1 SCP_HrTT-1 28..162 CDD:240186 34/165 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.