DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3253 and shams

DIOPT Version :10

Sequence 1:NP_611886.1 Gene:CG3253 / 37861 FlyBaseID:FBgn0041706 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_319364.4 Gene:shams / 1279607 VectorBaseID:AGAMI1_015150 Length:376 Species:Anopheles gambiae


Alignment Length:273 Identity:56/273 - (20%)
Similarity:95/273 - (34%) Gaps:84/273 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 TYP---QNHMRNLARKGCQTKYVFLTD----IDIVPSTNS-------VPQLNHFFRTANCTKSCA 215
            |:|   ::..|.|. |.|..:.:||..    :|.|...:|       |.::...|:..|.|: .|
Mosquito   131 TFPRANKDEWRKLF-KPCAAQRLFLPSLLQHLDAVLYVDSDTVFLSPVQEIWAMFQQFNATQ-FA 193

  Fly   216 YVIPTFEIDVRA----TFPR-------SKNALVRLIRKGLARPF--HEKVF-IYNQYATNFSKWL 266
            .:.|..| |:.|    .|.|       ..|:.|.|:.....|.|  .|.:. ||.:|.... .|.
Mosquito   194 GMAPEHE-DMNAGWYNRFARHPYYGELGVNSGVMLMNLTRMREFRWEEHILPIYREYRLQL-VWG 256

  Fly   267 SPNTNETEVSVSHVVTNFEFLYEP-----------------FYIAVDNAP-----AHDERFLGYG 309
            ..:           :.|..|.|.|                 .|::|.:||     .|..|  ||.
Mosquito   257 DQD-----------ILNVLFHYNPDRLYVFPCDWNYRADHCMYMSVCDAPDGVKIIHGNR--GYF 308

  Fly   310 FTRNSQVYEMHIAGYQFYVLSPVFTGHW--GLQRKQARPAWREQQNNANRRKFDVFKSEIFVRYK 372
            .:|...::.:..:..:.:.......|::  .::.....|      :|:|..|       :..::.
Mosquito   309 HSRAQPIFNLIYSTIEEFTFRTDVYGNFIRTIEESLVLP------SNSNCDK-------LLDKFL 360

  Fly   373 NDPRLLLKAKKNQ 385
            .|||...  |:||
Mosquito   361 QDPRKYF--KENQ 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3253NP_611886.1 Glyco_transf_49 52..371 CDD:464027 50/257 (19%)
shamsXP_319364.4 Glyco_tranf_GTA_type 63..355 CDD:472172 50/253 (20%)

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