DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4049 and SMARCA2

DIOPT Version :10

Sequence 1:NP_611885.3 Gene:CG4049 / 37860 FlyBaseID:FBgn0034976 Length:1669 Species:Drosophila melanogaster
Sequence 2:NP_003061.3 Gene:SMARCA2 / 6595 HGNCID:11098 Length:1590 Species:Homo sapiens


Alignment Length:1871 Identity:364/1871 - (19%)
Similarity:591/1871 - (31%) Gaps:750/1871 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDNPEANMEESNPNY--------DVNQRLQKPEGW-----PHVNEFHPSMMYPDDPRRYFHNAST 52
            |..|::.|::.:..|        ...:.:..|...     |.:....|..:.|.||:     |.:
Human   106 MGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQ-----AMS 165

  Fly    53 DPQHQP------QQH--------------------------------PQQQPEQHPEQHPQHPLH 79
            .|...|      |.|                                |..|.:|..:|..|....
Human   166 QPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQ 230

  Fly    80 SQQQPQQHPQQQPQQHPQQQTQQP------------PQL----------------QPQQHPQAQI 116
            .|||.||.|||||.|...||.|||            |:|                :|...|.|..
Human   231 QQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKLPVPAPGGRPSPAPPAAA 295

  Fly   117 QPP---IPVP-ISTPMEG----TMEVPVKM----PEYCPETSQPVE------------------- 150
            |||   :|.| :..|..|    .:::..|.    |...|:...|||                   
Human   296 QPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQE 360

  Fly   151 ---------PD------------RVIN----------------PLAEVAKNTVPYGHKRKNSAGE 178
                     ||            |::|                ...|.|.|:..|...::.:..|
Human   361 LENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE 425

  Fly   179 DQAANK-------------------------------------------KLSMAAA--------E 192
            .:...|                                           |||.|.|        |
Human   426 ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTERE 490

  Fly   193 EKKNSHL--RKNIRDVMNENNLDTTTLAAQREE----------------------SERLARVAGQ 233
            :||.:..  ::.:|.:|.|:......|..|:::                      ..:.|:.|.:
Human   491 QKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKE 555

  Fly   234 QKSMREIQKQVVHKQIFRILQLDESEGIESC--AVANPVEHHP-----PVDFPEEEIASDTF-DD 290
            :|..|..:|:..          :.:||.||.  ....|::...     ||.....|.....| .:
Human   556 KKKRRRRKKKAE----------ENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPE 610

  Fly   291 SNSSSLSGGSIEDVLHKGASVQPSEVVTIDDSSDDDCILLSEEEEEEDDEDLNESD-----DATN 350
            :..:|.....:|  ::.|..|.|.   :..:.||.|    .|||:||::....|::     |..:
Human   611 APKASQLDAWLE--MNPGYEVAPR---SDSEESDSD----YEEEDEEEESSRQETEEKILLDPNS 666

  Fly   351 SGMHVKDI--------YNVPDE--------NGQVVVNMAHPEGEETLYLAPQIAKVI----KPHQ 395
            ..:..||.        .:|.||        ..|....:||...|.   :..|.|.:|    |.:|
Human   667 EEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISER---VEKQSALLINGTLKHYQ 728

  Fly   396 IGGVRF---LYDNIIESTRRYNKSSGFGCILAHSMGLGKTLQVVSFCDIFLRHTSAK-TVLCVMP 456
            :.|:.:   ||:|.:..            |||..||||||:|.::.....:.|.... ..|.::|
Human   729 LQGLEWMVSLYNNNLNG------------ILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVP 781

  Fly   457 INTLQNWLSEFNMWIPRYSTDSNVRPRNFDIFVLNDQQKTLTARAKVILNWVHDG--GVLLIGYE 519
            ::||.||..||:.|.|.               |:....|...|..:.::..:..|  .|||..||
Human   782 LSTLSNWTYEFDKWAPS---------------VVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYE 831

  Fly   520 LFRLLALKLVKTRKRKGSVIRPDGMDSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLA 584
            .       ::|.:                       ..|.|.....:|.|||||:||.|..::..
Human   832 Y-------IIKDK-----------------------HILAKIRWKYMIVDEGHRMKNHHCKLTQV 866

  Fly   585 LK-EIRTRRRIVLTGYPLQNNLLEYWCMVDFVRPNYLGTRTEFCNMFERPI-QNGQCVDSTPDDI 647
            |. .....|||:|||.||||.|.|.|.:::|:.|....:.:.|...|..|. ..|:.||...::.
Human   867 LNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEET 931

  Fly   648 KLMRYRAHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFMTDVVRTKAFPN 712
            .|:..|   ||.:|..|:.||....::..||:|.||||...|:|.|:                  
Human   932 ILIIRR---LHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQK------------------ 975

  Fly   713 PLKAFAVCCKIWNHPDVLYNFLKKCETDLDLEIDEEVTKGAATPIVEPSADSSLSLASPLEKKIN 777
                            :||..::              .||             :.|....||...
Human   976 ----------------ILYRHMQ--------------AKG-------------ILLTDGSEKDKK 997

  Fly   778 GSGDPINSIETFSKAENQTLFNIPASSDLNAKYLNKSPSFYDEKPEPLNYGSFGSEGKNNYWMDS 842
            |.|.                                                             
Human   998 GKGG------------------------------------------------------------- 1001

  Fly   843 SILPKPGCVEVIKQTDTNMSSNFESITGSSEIVDLDTNEIKTVETTIQAPCSNNQLDNGCNAGKP 907
                                                   .||:..||.      ||...||    
Human  1002 ---------------------------------------AKTLMNTIM------QLRKICN---- 1017

  Fly   908 SEWNAAGSKNSSGVAAAEPFKKLLKSKQRNEEFSCSWAVDLMKNYVSGLISN------SPKMEIF 966
                             .|:     ..|..||   |:|..|  .|.:|:|:.      |.|.|:.
Human  1018 -----------------HPY-----MFQHIEE---SFAEHL--GYSNGVINGAELYRASGKFELL 1055

  Fly   967 FCILKESLNLGDRILLFSQSLLTLNLLEVYLKSSYVPGSNQLWTKNSSYFRLDGSTSSQERERLV 1031
            ..||.:......|:|||.|....:.::|.|..           .:|..|.||||:|.|::|..|:
Human  1056 DRILPKLRATNHRVLLFCQMTSLMTIMEDYFA-----------FRNFLYLRLDGTTKSEDRAALL 1109

  Fly  1032 NEFN-ANSNVKLFLISTRAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCFVYRI 1095
            .:|| ..|...:||:|||||.||:||..|:.|:|||:.|||..|.||..|.:|.||.....|.|:
Human  1110 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL 1174

  Fly  1096 VMDRCLEKKI---------YDRQIKKQGMSDRIVDECNPEAHLSM---KDITNLCQDYDSDEDTV 1148
            .....:|:||         .|:::.:.||.|:........|.|..   .:..|..:|...|::|:
Human  1175 CTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETL 1239

  Fly  1149 EE------------------------------------------VNKSTGDLSKPGSPSEE---- 1167
            .:                                          :.|...::.:.....||    
Human  1240 NQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIF 1304

  Fly  1168 --GSKP-GSANMSPNASNKS-----NNGPTKPLDDQ----------NTPKSPNGASHSPIKTEKN 1214
              ||:. ...:.|...:.|.     .:|..:.::::          |..|.|  |.....|.:|.
Human  1305 GRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDP--AKEDVEKAKKR 1367

  Fly  1215 DGQEHA-----------VHVDGIINTILDMHRHCVTKEPFMHESLLVDQKDRKLSQAEKRQAHRS 1268
            .|:..|           ..::.||:|:                   ::.|||  ...||..::..
Human  1368 RGRPPAEKLSPNPPKLTKQMNAIIDTV-------------------INYKDR--CNVEKVPSNSQ 1411

  Fly  1269 YELEKKAA---VNQRFTYAPAKMN----YKIVNNDGTVITKPMNQQIKTNTSSSTGGRSTRWIPA 1326
            .|:|..::   :::.|...|::..    |:::..  .|..|.:.::|:.:...|.|         
Human  1412 LEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRK--PVDFKKIKERIRNHKYRSLG--------- 1465

  Fly  1327 DVWQRQGMTAQEMTLPLDVVIPTNSADKANIILKAGQRVMVLKSAKGIYMQLDSGKIIAIRTTAK 1391
                         .|..||::..::|...|:              :|..:..||   |.:::..|
Human  1466 -------------DLEKDVMLLCHNAQTFNL--------------EGSQIYEDS---IVLQSVFK 1500

  Fly  1392 TEPEKTNKDDVIDITDDGDTDTTKPQSPEEDVKDLTADDEPRVVKNKESNPATTSRPEMPAKDRK 1456
            :..:|..|::..:       |.:..:..|||.::  ::.|.:.||.|         .::..||.|
Human  1501 SARQKIAKEEESE-------DESNEEEEEEDEEE--SESEAKSVKVK---------IKLNKKDDK 1547

  Fly  1457 STENVQHFKSQTQPNTTLATTTNQHQLPSDLTYSQPQQSHQQPQQQASQQQ 1507
            ..:.   .|.:.:||...|     ..:.||....:.|...:|.:...:..:
Human  1548 GRDK---GKGKKRPNRGKA-----KPVVSDFDSDEEQDEREQSEGSGTDDE 1590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4049NP_611885.3 DEXHc_ARIP4 391..653 CDD:350827 72/273 (26%)
HepA <392..1121 CDD:440319 175/752 (23%)
SMARCA2NP_003061.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71
Atrophin-1 <46..>450 CDD:460830 64/348 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..176 13/74 (18%)
QLQ 173..207 CDD:462622 2/33 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..334 35/121 (29%)
HSA 436..508 CDD:214727 9/71 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 551..592 9/50 (18%)
BRK 589..632 CDD:462196 8/44 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 627..672 12/51 (24%)
DEXHc_SMARCA2 701..951 CDD:350821 84/312 (27%)
PLN03142 720..>1202 CDD:215601 173/750 (23%)
DEGH box 851..854 2/2 (100%)
SnAC 1259..1326 CDD:464219 7/66 (11%)
Bromodomain 1333..>1419 CDD:445827 18/108 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1344..1383 8/40 (20%)
Bromo_SNF2L2 1382..1506 CDD:99947 28/185 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1506..1590 20/109 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.