DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNQ3 and RPL37B

DIOPT Version :10

Sequence 1:NP_004510.1 Gene:KCNQ3 / 3786 HGNCID:6297 Length:872 Species:Homo sapiens
Sequence 2:NP_010788.1 Gene:RPL37B / 852111 SGDID:S000002908 Length:88 Species:Saccharomyces cerevisiae


Alignment Length:20 Identity:6/20 - (30%)
Similarity:11/20 - (55%) Gaps:0/20 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   176 WAAGCCCRYKGWRGRLKFAR 195
            |||....|:....||:::.:
Yeast    49 WAAKAKRRHTTGTGRMRYLK 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNQ3NP_004510.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Ion_trans 121..363 CDD:459842 6/20 (30%)
Selectivity filter. /evidence=ECO:0000250 316..321
Mediates interaction with calmodulin. /evidence=ECO:0000269|PubMed:27564677 356..537
KCNQ_channel 446..650 CDD:460954
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 575..611
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 764..872
KCNQC3-Ank-G_bd 770..866 CDD:463411
RPL37BNP_010788.1 PTZ00073 1..83 CDD:240257 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.