DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gek and AT3G23310

DIOPT Version :9

Sequence 1:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster
Sequence 2:NP_188973.2 Gene:AT3G23310 / 821911 AraportID:AT3G23310 Length:568 Species:Arabidopsis thaliana


Alignment Length:478 Identity:171/478 - (35%)
Similarity:254/478 - (53%) Gaps:91/478 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EKGVSDFLK-LSKPFVHIVRKLR--LSRDDFDILKIIGRGAFGEVCVVQMISTEKVYAMKILNKW 134
            |:...:.|| |.|.....:|:.|  :..|||:.|.:||:||||||.:.:..:|..|||||.|.|.
plant    90 EEEQKNLLKDLEKKETEYMRRQRHKMGTDDFEPLTMIGKGAFGEVRICREKTTGNVYAMKKLKKS 154

  Fly   135 EMLKRAETACFREERDVLVFGDRQWITNLHYAFQDNINLYLVMDYYCGGDLLTLLSKFEDKLPED 199
            |||:|.:....:.||::|...|...|..|:.:|||...|||:|:|..|||::|||.: :|.|.||
plant   155 EMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMR-KDTLTED 218

  Fly   200 MAKFYITEMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLADFGSCLRLD------KDGTVQSN 258
            .|:||:.|.:|||.|||:..|:||||||||:|||:.||::|:|||.|..||      ||..|..|
plant   219 EARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRSGHMKLSDFGLCKPLDCSILQEKDFVVAHN 283

  Fly   259 VA------------------------------------VGTPDYISPEILRAMEDGKGRYGTECD 287
            ::                                    |||||||:||:|.     |..||.|||
plant   284 LSGALQSDGRPVAPRRTRSQMEQLQNWQRNRRMLAYSTVGTPDYIAPEVLL-----KKGYGMECD 343

  Fly   288 WWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPE 352
            |||||..|||||.|..|||::..:.|..||:|.:|....|.:    .::|..::||:|:|:|..|
plant   344 WWSLGAIMYEMLVGFPPFYSDEPMTTCRKIVNWKNYLKFPDE----VRLSPEAKDLICRLLCNVE 404

  Fly   353 NRLGQNGIQDFMDHPWFVGIDWKNIRQGPAPYVPEVSSPTDTSNFD-VDDNDVRLTDSIPPSANP 416
            .|:|..|..:..:||||.|::|:.:.|..|.::|:|:...||.||: .::.|.::..:  |.:.|
plant   405 QRIGTKGANEIKEHPWFSGVEWEKLYQMKAAFIPQVNDELDTQNFEKFEETDKQVPKT--PKSGP 467

  Fly   417 ---AFSGFHLPFIGFTF---------------SLTSSSTLDSKKNQSSGFGDDTLDTISSPQ--- 460
               ..|...:.|:|:|:               .|...||...:.:..|.|.|::..:.:|.|   
plant   468 WRKMLSSKDINFVGYTYKNVEIVNHDQLPGIAELKKKSTKPKRPSIKSLFEDESASSTTSHQGSF 532

  Fly   461 LAILP------------SNNSET 471
            :.:||            |::|||
plant   533 MKLLPTQIEVPEKEDKSSSSSET 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 149/377 (40%)
S_TKc 100..369 CDD:214567 129/310 (42%)
KELK 478..556 CDD:292424
CEP63 492..749 CDD:293650
CEP63 652..880 CDD:293650
C1_1 990..1040 CDD:278556
PH_MRCK 1049..1182 CDD:269949
CNH 1211..1486 CDD:279162
CRIB 1544..1580 CDD:238077
AT3G23310NP_188973.2 STKc_NDR_like 118..485 CDD:270750 150/378 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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