DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gek and Dmpk

DIOPT Version :10

Sequence 1:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster
Sequence 2:XP_063117378.1 Gene:Dmpk / 308405 RGDID:1309825 Length:687 Species:Rattus norvegicus


Alignment Length:616 Identity:256/616 - (41%)
Similarity:355/616 - (57%) Gaps:110/616 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LDYLLDTFIVLYDECSNSSLRREKGVSDFLKLSKPFVHIVRKLRLSRDDFDILKIIGRGAFGEVC 115
            |:.|||..:.::.|...|.|.::|.|:|||:..:|....::::||.||||:|||:||||||.||.
  Rat    22 LEPLLDLLLGVHQELGASHLAQDKYVADFLQWVEPIAARLKEVRLQRDDFEILKVIGRGAFSEVA 86

  Fly   116 VVQMISTEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQWITNLHYAFQDNINLYLVMDYY 180
            ||:|..|.:||||||:|||:||||.|.:||||||||||.|||:|||.||:||||...|||||:||
  Rat    87 VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVKGDRRWITQLHFAFQDENYLYLVMEYY 151

  Fly   181 CGGDLLTLLSKFEDKLPEDMAKFYITEMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLADFGS 245
            .|||||||||||.:::|.:||:||:.|:::||:|:|::.||||||||||:|||:.||:|||||||
  Rat   152 VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGS 216

  Fly   246 CLRLDKDGTVQSNVAVGTPDYISPEILRAM--EDGKGRYGTECDWWSLGVCMYEMLYGETPFYAE 308
            ||:|..||||:|.||||||||:|||||:|:  ..|.|.||.|||||:|||..|||.||:|||||:
  Rat   217 CLKLQPDGTVRSLVAVGTPDYLSPEILQAVGGGPGAGSYGPECDWWALGVFAYEMFYGQTPFYAD 281

  Fly   309 SLVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPENRLGQNGIQDFMDHPWFVGID 373
            |..|||.||::::...:||..:   ..|.|.:|||:..|:|..|.|||:.|..||..||:|.|:|
  Rat   282 STAETYAKIVHYREHLSLPRAD---MGVPEEAQDLIRGLLCPAEIRLGRGGAGDFQKHPFFFGLD 343

  Fly   374 WKNIRQGPAPYVPEVSSPTDTSNFDVDDNDVRLT-------DSIPPSANPAFSGFHLPFIGFTFS 431
            |:.:|....|:.|:....|||.||||.::  |||       :::.........|.||||:|::: 
  Rat   344 WEGLRDSVPPFTPDFEGATDTCNFDVVED--RLTAMVSGGGETLSDMQEDMALGVHLPFVGYSY- 405

  Fly   432 LTSSSTLDSKKNQSSGFGDDTLDTISSPQLAI--LPSNNSETPVDSVQLKALNDQLAALKQEKAE 494
                |.:.|:.||.:   |.|...:.:.||.:  |...:...||......|.....||:....||
  Rat   406 ----SCMASRDNQVT---DPTPMELEALQLPVSDLQGLDLPPPVSPPDQAAEEADPAAVPVPPAE 463

  Fly   495 LSKQHNEVFERLKTQDSELQDAISQRNIAMMEYSEVTEKLSELRNQKQKLSRQVRDKEEELDGAM 559
                 .|....|:    |||:|:.:..:.                 :|.|||       ||:...
  Rat   464 -----TETMVTLR----ELQEALEEEVLT-----------------RQSLSR-------ELEAIR 495

  Fly   560 QKNDSLRNELRKSDKTRRELELHIEDAVIEAAKEKKLREHAEDCCRQLQMELRKGSSSVETTMPL 624
            ..|.:..::|::::...|:||.|:                     ||||                
  Rat   496 TANQNFSSQLQEAEVRNRDLEAHV---------------------RQLQ---------------- 523

  Fly   625 SISSEMSSYEIERLEL-----QFSEKLSHQQ 650
                       ||:|:     ...|.|:|.|
  Rat   524 -----------ERMEMLQAPGAAGESLTHSQ 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 195/340 (57%)
KELK 477..556 CDD:464876 16/78 (21%)
CCDC158 <481..>894 CDD:464943 33/175 (19%)
C1_MRCK 990..1042 CDD:410359
PH_MRCK 1049..1182 CDD:269949
CNH 1215..1484 CDD:459938
CRIB 1544..1580 CDD:238077
DmpkXP_063117378.1 None
Blue background indicates that the domain is not in the aligned region.

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