DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gek and Cdc42bpg

DIOPT Version :9

Sequence 1:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster
Sequence 2:XP_038964401.1 Gene:Cdc42bpg / 293693 RGDID:1307260 Length:1558 Species:Rattus norvegicus


Alignment Length:1596 Identity:604/1596 - (37%)
Similarity:886/1596 - (55%) Gaps:240/1596 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LDYLLDTFIVLYDECSNSSLRREKGVSDFLKLSKPFVHIVRKLRLSRDDFDILKIIGRGAFGEVC 115
            ||.|||..:.::.|.|::.||||:.|:.||..:.|||..|::|||.||||:|||:|||||||||.
  Rat    22 LDGLLDLLLGVHQELSSAPLRRERNVAQFLSWAGPFVTKVKELRLQRDDFEILKVIGRGAFGEVA 86

  Fly   116 VVQMISTEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQWITNLHYAFQDNINLYLVMDYY 180
            ||:...:.:::|||:|:|||||||||||||||||||||.||.:|:|.|||||||...||||||||
  Rat    87 VVRQRDSGQIFAMKMLHKWEMLKRAETACFREERDVLVKGDSRWVTALHYAFQDEEYLYLVMDYY 151

  Fly   181 CGGDLLTLLSKFEDKLPEDMAKFYITEMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLADFGS 245
            .|||||||||:|||:||.::|:||:.||:|||:|:||:.|||||:||||:|||..||:|||||||
  Rat   152 AGGDLLTLLSRFEDRLPPELAQFYLAEMVLAIHSLHQLGYVHRDVKPDNILLDMNGHIRLADFGS 216

  Fly   246 CLRLDKDGTVQSNVAVGTPDYISPEILRAMEDGKGRYGTECDWWSLGVCMYEMLYGETPFYAESL 310
            ||||:.:|.|.|:||||||||||||||:|||:|||.||.:|||||||||.||:|:||||||||||
  Rat   217 CLRLNNNGMVDSSVAVGTPDYISPEILQAMEEGKGHYGPQCDWWSLGVCAYELLFGETPFYAESL 281

  Fly   311 VETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPENRLGQNGIQDFMDHPWFVGIDWK 375
            ||||||||||::....||...   .|..::|.|:.:|:|..|.|||:.|:.||..||:|.|:||:
  Rat   282 VETYGKIMNHEDHLQFPSDVD---DVPASAQALIRQLLCRQEERLGRGGLDDFRSHPFFEGVDWE 343

  Fly   376 NIRQGPAPYVPEVSSPTDTSNFDVDDNDVRLTDSIPPSANPAFSGFHLPFIGFTFSLTSSSTLDS 440
            .:....|||:||:..|.|||||||||:.:...:::|||::.||||.||||:|||:  ||.|..|.
  Rat   344 RLATSTAPYIPELRGPVDTSNFDVDDDTLNRPETLPPSSHGAFSGHHLPFVGFTY--TSGSLTDD 406

  Fly   441 KKNQ--------SSGFGDDTLDTISSPQLA-ILPS--NNSETPVDSVQL----KALNDQLA-ALK 489
            |.::        ..|.....::.....|:| :||.  ::|..|.:.|:|    :.|.::|. .|:
  Rat   407 KSSELMATPEWKPHGVEQMKVELSQKCQVALLLPEALHSSLQPQELVRLQKEVQVLQEKLTETLR 471

  Fly   490 QEKAELSK-------------QHNEVFERLKTQDSELQDAISQRNIAMMEYSEVTEKLSELRNQK 541
            ..||.||:             |..:..:||:.:.:|.|.|:..|:          .:|.:.:|::
  Rat   472 DSKASLSQADGLHVRSPAPDIQLQQEKDRLQQELAEAQAALQVRD----------AELCQAQNRQ 526

  Fly   542 QKLSRQVRDKEEELDGAMQKNDSLRNELRKSDKTRRELELHIEDAVIEAAKEKKLREHAEDCCRQ 606
            ::..:::.:.:|....|..:..:|.::|.::...|||||..:.....|..              |
  Rat   527 EEFLQRLWEAQEREAAAASQIQALNSQLEEAWVVRRELEGQVNTLSQEVT--------------Q 577

  Fly   607 LQMELRKGSSS-VETTMPLSISSEMSSYEIERLELQFSEKLSHQQTRHNMELEALREQFSELENA 670
            ||.:.::.||| .:|......::.:.|.|.:..|.|..:           |:.|||||.....:.
  Rat   578 LQGQCKQDSSSQAKTVHAAPETNGIGSPEGQSQEAQLRK-----------EVAALREQLECACSQ 631

  Fly   671 NLALTKE-----LQQTQERLKYTQMESITDSAETLLELKKQHDLEKSSWFEEKQRLSSEVNLKSK 730
            .:.:.||     ||:..:||.                             .|::||:.|::|:.:
  Rat   632 GVNVGKEEVLCRLQEENQRLS-----------------------------REQERLAEELDLELQ 667

  Fly   731 SLKELQAEDDEIFKELRMKREAITLWERQMAEIIQWVSDEKDARGYLQALATKMTEELEYLKHVG 795
            |.:.|:.|          :||:.:.||.|:|:|:.||:|||.:|||||||||||.||||.|::||
  Rat   668 SRQRLEGE----------RRESESNWEAQIADILSWVNDEKVSRGYLQALATKMAEELESLRNVG 722

  Fly   796 --TFNNNGVDNKNWRNRRSQKLDKMELLNLQSALQREIQAKNMISDELSQTRSDLISTQKEVRDY 858
              |.....:|:: |:.||.||::....|.|||||:.||:||..:.::|:|.:......::.:::.
  Rat   723 TQTLPTRPLDHQ-WKARRLQKMEASARLELQSALEAEIRAKQGLQEQLTQVQEAQRQAERRLQEA 786

  Fly   859 KKRYDSILHDFQKKETELR-DLQKGGLEYSE---------SFLNKSTHHGLSSAFFRDMSKNSEI 913
            :|:..::    |::..||| :||..|...::         ||.|...                  
  Rat   787 EKQNQAL----QQEVAELREELQARGPGDAKPCTSLIPLLSFWNTEK------------------ 829

  Fly   914 IDSAESFGNESGDNFTPNFFQSGNSGMLFNYEPKYAGKNNKDHSSMKEASVSDLSR-EESDQLVK 977
             |||:..|| ||        :|..||......|:  |:.     |::..||  ..| ..::....
  Rat   830 -DSAKDPGN-SG--------ESPRSGAEAELRPE--GRR-----SLRMGSV--FPRVPAANPTPA 875

  Fly   978 ESQKKVPGNTAIHQFLVRTFSSPTKCNHCTSLMVGLTRQGVVCEICGFACHTICCQKVPTTCPVP 1042
            |.....||:   |....|:|.|||||.||||||:||.|||:.|:.||:.||:.|..:.| .||||
  Rat   876 EGPPAKPGS---HTLRPRSFPSPTKCLHCTSLMLGLGRQGLGCDTCGYFCHSACATQAP-PCPVP 936

  Fly  1043 MDQTKRPLGIDPTRGIGTAYEGYVKVPKSGVIKRGWIRQFVVVCDFKLFLYDISPDRCALPSVSV 1107
            .:..:..||:.|..|.||||||::.||:...::|||.|.:..:.|.:|.|:|....|.::.|..:
  Rat   937 PELLRTALGVHPETGTGTAYEGFLSVPRPSGVRRGWQRVYAALSDSRLLLFDAPDPRGSMASGVL 1001

  Fly  1108 SQVLDMRDPEFSVGSVRESDVIHAAKKDVPCIFKIKTALIDGGLSLNT-LMLADNESEKSKWVIA 1171
            .|.||:|||:||...|...|||||..||:|.||::..:.:....|..| |:||:||.|:.:|:..
  Rat  1002 LQALDLRDPQFSATPVLAPDVIHAQSKDLPRIFRVTASQLTVPPSTCTVLLLAENEGERERWLQV 1066

  Fly  1172 LGELHRILKRNSLPNTAIFKVNEILDNTLSLIRNALCSVIIYPNQILLGTEDGLFYINLDQYEIA 1236
            |.||.|:|.........::.:.|..||.|.|:.:.||:.||...::.||||:|||.|:|...:|.
  Rat  1067 LSELQRLLLDARPRPRPVYTLKEAYDNGLPLLPHTLCAAIIDRERLALGTEEGLFVIHLHSNDIF 1131

  Fly  1237 RIGESKKILQLWYIEEEQILVILCGKQRNLRLLPIRALEASDVEWIKVVESKNCISACTGII--R 1299
            ::|:.:::.:|.......:||:|||:..::||..:..||.::|...|:.||:.|.:...|.|  .
  Rat  1132 QVGDCRRVQRLTVSSAAGLLVVLCGRGPSVRLFTLSELENAEVAGAKIPESRGCQALVAGSILQA 1196

  Fly  1300 RFPNIVYSFIIALKRPNNHTQIVVYEIN------RTRTRHQKTCEFTIGYMAQHLQILSDMRLVV 1358
            |.|.:    .:|:||     |::.|::.      :.|.|     |.......|.|.:|.| ||.|
  Rat  1197 RTPVL----CVAVKR-----QVLCYQLGPGPGPWQRRIR-----ELQAPAPVQSLGLLGD-RLCV 1246

  Fly  1359 AHQSGFTAYFLRGEATAMSLVHPENQLCAFLNYSGVDAVRVIEILCPSGGNFG-----------E 1412
            .....|..|.|..||..::|            .:|:    |.|.|..|.|..|           |
  Rat  1247 GAAGTFALYPLLNEAAPLAL------------GTGL----VAEELPASRGGLGEALGAVELSLSE 1295

  Fly  1413 YLLVFQTLAIYVDLQGRKSRDREIMYPAFPTYITFCDGHLLVFSDTHLDIFNTQTAEWVQSIGLK 1477
            .||:|.|..:|||..|||||..|:::|..||...:...:|.|||:..:|:|:.:.|||||::.||
  Rat  1296 LLLLFATAGVYVDGAGRKSRSHELLWPVAPTGWGYTAPYLTVFSENSIDVFDVRRAEWVQTVPLK 1360

  Fly  1478 QSLPLNNLGNVVLSSVNDTPLIVYLSNIHTK----GLLQYRDGNRKGL--PSIKRRFSIREINKT 1536
            :..|||..|:::|.......| .||.|...:    .:....|.:|:.|  ...||||..|..::.
  Rat  1361 KVRPLNPEGSLLLYGTEKVRL-TYLRNPLAEKDEFDIPDLTDNSRRQLFRTKSKRRFFFRVSDEL 1424

  Fly  1537 IKSDR---------RSKMISAPTNFNHISHMGPGDG 1563
            .:..|         |||.||.||||||:.|:||.:|
  Rat  1425 RQQQRREMLKDPFVRSKFISPPTNFNHLVHVGPTEG 1460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 216/331 (65%)
S_TKc 100..369 CDD:214567 182/268 (68%)
KELK 478..556 CDD:292424 18/95 (19%)
CEP63 492..749 CDD:293650 54/275 (20%)
CEP63 652..880 CDD:293650 74/235 (31%)
C1_1 990..1040 CDD:278556 26/49 (53%)
PH_MRCK 1049..1182 CDD:269949 55/133 (41%)
CNH 1211..1486 CDD:279162 93/293 (32%)
CRIB 1544..1580 CDD:238077 13/20 (65%)
Cdc42bpgXP_038964401.1 STKc_DMPK_like 69..399 CDD:270748 217/334 (65%)
SMC_prok_B <450..809 CDD:274008 115/437 (26%)
C1_MRCKgamma 885..936 CDD:410416 28/51 (55%)
PH_MRCK 944..1076 CDD:269949 55/131 (42%)
CNH 1103..1366 CDD:395630 92/293 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3544
eggNOG 1 0.900 - - E2759_KOG0612
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52599
OrthoDB 1 1.010 - - D117302at33208
OrthoFinder 1 1.000 - - FOG0001346
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103075
Panther 1 1.100 - - O PTHR22988
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1218
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.830

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