DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gek and Lats1

DIOPT Version :9

Sequence 1:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster
Sequence 2:NP_034820.1 Gene:Lats1 / 16798 MGIID:1333883 Length:1129 Species:Mus musculus


Alignment Length:409 Identity:146/409 - (35%)
Similarity:227/409 - (55%) Gaps:73/409 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 SDFLKLSKPFVHIVRKLRLSRDDFDILKIIGRGAFGEVCVVQMISTEKVYAMKILNKWEMLKRAE 141
            |::::|        ::.::.:..|..:|.:|.|||||||:.:.:.|:.:||.|.|.|.::|.|.:
Mouse   689 SNYIRL--------KRAKMDKSMFVKIKTLGIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQ 745

  Fly   142 TACFREERDVLVFGDRQWITNLHYAFQDNINLYLVMDYYCGGDLLTLLSKFEDKLPEDMAKFYIT 206
            .|..:.|||:|...|.:|:..|:|:|||..|||.||||..|||:::||.:. ...||::|:|||.
Mouse   746 VAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPENLARFYIA 809

  Fly   207 EMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLADFGSCL------------------------ 247
            |:..|:.|:|::.::||||||||:|:|:.||::|.|||.|.                        
Mouse   810 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHPRQDSMDF 874

  Fly   248 -----------------RLDKDGTVQ-----SNVAVGTPDYISPEILRAMEDGKGRYGTECDWWS 290
                             .|::....|     ::..||||:||:||:|  :..|   |...|||||
Mouse   875 SNEWGDPSNCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVL--LRTG---YTQLCDWWS 934

  Fly   291 LGVCMYEMLYGETPFYAESLVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPENRL 355
            :||.::|||.|:.||.|::.:||..|::|.|...::|.|.    |:|..:.||:.||...||:||
Mouse   935 VGVILFEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQA----KLSPEASDLIIKLCRGPEDRL 995

  Fly   356 GQNGIQDFMDHPWFVGIDW-KNIRQGPAPYVPEVSSPTDTSNFDVDDNDVRLTD-----SIPPSA 414
            |:||..:...||:|..||: .::||..|.|:|:::.||||||||..|.|...:|     :|..:.
Mouse   996 GKNGADEIKAHPFFKTIDFSSDLRQQSASYIPKITHPTDTSNFDPVDPDKLWSDGSEEENISDTL 1060

  Fly   415 NPAFSGFHLP---FIGFTF 430
            |..:.....|   |..|||
Mouse  1061 NGWYKNGKHPEHAFYEFTF 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 142/386 (37%)
S_TKc 100..369 CDD:214567 118/314 (38%)
KELK 478..556 CDD:292424
CEP63 492..749 CDD:293650
CEP63 652..880 CDD:293650
C1_1 990..1040 CDD:278556
PH_MRCK 1049..1182 CDD:269949
CNH 1211..1486 CDD:279162
CRIB 1544..1580 CDD:238077
Lats1NP_034820.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71
UBA_like_SF 103..143 CDD:304366
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..216
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..276
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..317
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 363..407
PPxY motif 1 372..375
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 513..630
Interaction with YAP1. /evidence=ECO:0000250 525..654
PPxY motif 2 555..558
STKc_LATS1 702..1083 CDD:270775 144/388 (37%)
S_TKc 704..1009 CDD:214567 118/314 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1104..1129
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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