DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gek and rock1

DIOPT Version :9

Sequence 1:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster
Sequence 2:XP_002934180.3 Gene:rock1 / 100496057 XenbaseID:XB-GENE-984661 Length:1360 Species:Xenopus tropicalis


Alignment Length:1249 Identity:357/1249 - (28%)
Similarity:605/1249 - (48%) Gaps:222/1249 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QFSLDYLLDTFIVLYDECSNSSLRREKGVSDFLKLSKPFVHIVRKLRLSRDDFDILKIIGRGAFG 112
            :.:.|.|||....:..:....::|:.|.:.:||...|..:..||.||:..||::::|:|||||||
 Frog    24 EVNTDCLLDGLDAMVYDLDFPAMRKNKNIDNFLNRYKDTMSKVRDLRMKADDYEVVKVIGRGAFG 88

  Fly   113 EVCVVQMISTEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQWITNLHYAFQDNINLYLVM 177
            ||.:|:..|:.||||||:|:|.||:||:::|.|.||||::.|.:..|:..|.|||||:..||:||
 Frog    89 EVQLVRHKSSRKVYAMKLLSKLEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 153

  Fly   178 DYYCGGDLLTLLSKFEDKLPEDMAKFYITEMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLAD 242
            :|..||||:.|:|.::  :||..|:||..|::||:::||.:.::|||:||||:||||.||::|||
 Frog   154 EYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLAD 216

  Fly   243 FGSCLRLDKDGTVQSNVAVGTPDYISPEILRAMEDGKGRYGTECDWWSLGVCMYEMLYGETPFYA 307
            ||:|::::::|.|:.:.|||||||||||:|:: :.|.|.||.||||||:||.:||||.|:|||||
 Frog   217 FGTCMKMNREGMVRCDTAVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280

  Fly   308 ESLVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPENRLGQNGIQDFMDHPWFVGI 372
            :|||.||.|||||:|....|...    .:|:.:::|:|..:...|.|||:||:::...||:|...
 Frog   281 DSLVGTYSKIMNHKNSLTFPEDS----DISKEAKNLICAFLTDREVRLGRNGVEEIKRHPFFKND 341

  Fly   373 D--WKNIRQGPAPYVPEVSSPTDTSNFD--VDDNDVRLTDSIPPSANPAFSGFHLPFIGFTF--- 430
            .  |:.:|...||.||:::|..||||||  .:|.....|..||    .||.|..|||:|||:   
 Frog   342 QWAWETLRDTVAPVVPDLTSDIDTSNFDDLEEDKGDEETFPIP----KAFVGNQLPFVGFTYYSN 402

  Fly   431 ------------SLTSSSTLDS------KKN-------------------QSSGFGDDTLDTISS 458
                        ...||||:|.      :||                   |.....:..||.|. 
 Frog   403 RQYLDDPSANPNDNRSSSTVDKNLVENLQKNIYQLEEQLHNEMQLKDEMEQKCRMSNIKLDKIM- 466

  Fly   459 PQLAILPSNNSETPVDSVQLKALNDQLAALKQEKAELSKQHNEVFERLKTQDSE----LQDAISQ 519
                      .|...:..|.|.|...:|..::||..|..:.|| ::|...|:||    :::.:|.
 Frog   467 ----------KELDEEGNQRKNLESLVAQTEKEKIMLQHRINE-YQRKAEQESEKRRNVENEVST 520

  Fly   520 RNIAMMEYSEVT-------EKLSELRNQKQKLSR----------QVRDKEEELDGAMQKNDSLRN 567
            ....:.::.:::       ||:::|:.|.::.:.          ::|..:.|:...:.:.::|..
 Frog   521 LKDQLEDFKKISQTSHITNEKIAQLQKQLEEANDLLRTESDTAVRLRKSQTEMSKTVSQLEALNR 585

  Fly   568 ELR------KSDKTRRELE-LHIEDAVIEAAKEK---------------KLREHAEDCCRQLQM- 609
            ||:      :|.|::.|.: .|::.|:....:::               .|:|..:.....|:| 
 Frog   586 ELQDRCRLLESSKSQVEKDYFHLQAALDSERRDRSQGSEMIGDLQARMASLQEELKHVKNNLEMA 650

  Fly   610 --------------ELRKGSSSVE-----TTMPLSISSEMSSYEIERLEL-----QFSEKLSHQQ 650
                          |..|.:..::     .|:...:..|::.:::.:..|     .|.|:.|...
 Frog   651 ESERKRAQDLLNNSEKEKNNLEIDLNYQLKTLQQMLEQEINEHKVTKARLSDRHQSFEEEKSVAM 715

  Fly   651 TRHNMELEALREQFSELENANLALTKELQQTQERLKYT--QMESITDSAETLLELKKQHDLEKSS 713
            ....|:::..|....:.||..:.:.|:....:..||.:  :||..|...|.|.|..||..|:.. 
 Frog   716 CEMEMKVKGERAAKEKAENRRVEIEKQCSMLEFDLKQSRQKMEHFTQQRERLEEEVKQLTLQLE- 779

  Fly   714 WFEEKQRL--SSEVNLKSKSLKELQAEDDEIFKELRMKREAITLWERQMAEI----------IQW 766
             .|.|:|:  .:|:|..:..:..|:..:.::.:|:....||..|.|.::.::          ::.
 Frog   780 -HETKKRIVTQNELNQHAGLVDTLKGSEKQLKQEINTLLEAKRLLEFELGQLTKQYRGNEGQMRE 843

  Fly   767 VSDEKDARGYLQALATKMTEELEYLKHVGTFNNNGVDNKNWRNRRSQKLDKM--ELLNLQSAL-- 827
            :.|:.:|..|...|......||:          ..|:.|   .:.|.:|:|.  ||.|.:..|  
 Frog   844 LQDQLEAEQYFSTLYKTQVRELK----------EEVEEK---TKHSHELEKRVHELYNDKDTLTA 895

  Fly   828 QREIQAKNMISDELSQTRSDLISTQK-EVRDYKKRYDS-ILHDFQKKETELRDLQKGGLEYSESF 890
            |.::......|::|::|   |:..|. ||....|:..: ...|..:|:..:|.     ||.:.|.
 Frog   896 QLDLAETKAESEQLART---LLEEQYFEVNQENKKLSARSWQDNTEKDHTIRK-----LEETNST 952

  Fly   891 LNKSTHHGLSSAFFRDMSKNSEIIDSAESFGNESGD------NFTPNFFQSGNSGMLFNYEP--K 947
            |.|.. ..|:.|       |.|:.:.|.....|..:      |...::.::.|:......:.  |
 Frog   953 LTKDV-QTLTKA-------NEELSEKARKLEQEYKEKEEEIYNLRNSYEKAINTEKTLKTQAVNK 1009

  Fly   948 YAG-KNNKDHS-SMKEASVSDLSREESDQLVKE---SQKKVPGNTAIHQF---LVRTFSSPT-KC 1003
            .|. .|.||.. ..|:|:..||.::|.:....:   :|:|...|..:.::   |..|....| :.
 Frog  1010 LAEIMNRKDFKLDRKKANTQDLRKKEKENRKLQLDLNQEKEKYNQMVAKYQKELDETLMQLTEES 1074

  Fly  1004 NHCTSLMVGL-TRQGVVCEICGFACHTICCQKVPTTCPVPMDQTK-RPLGIDPTRGI--GTAYEG 1064
            |:...|.:.| :::..:.::          :.......:.||.|. ..|..|.|.||  .:..||
 Frog  1075 NYKNELQMQLDSKESDIEQL----------RARLADLQLRMDSTSVASLQPDDTDGIIGESRIEG 1129

  Fly  1065 YVKVPKSGVIKR-GWIRQFVVVCDFKLFLYDISPDRCALPSVSVSQVLDMRDPEFSVGSVRESDV 1128
            ::.:|..|.||| ||.:|:|||...|:..|:   |.......|.|.|||: |..|.|.:|.:.||
 Frog  1130 WLSIPNRGNIKRYGWKKQYVVVSSKKILFYN---DEQNKEQSSPSMVLDI-DKLFHVRAVTQGDV 1190

  Fly  1129 IHAAKKDVPCIFKI 1142
            ..|..:::|.||:|
 Frog  1191 YRANTEEIPRIFQI 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 165/335 (49%)
S_TKc 100..369 CDD:214567 137/268 (51%)
KELK 478..556 CDD:292424 19/98 (19%)
CEP63 492..749 CDD:293650 58/328 (18%)
CEP63 652..880 CDD:293650 54/247 (22%)
C1_1 990..1040 CDD:278556 6/54 (11%)
PH_MRCK 1049..1182 CDD:269949 37/97 (38%)
CNH 1211..1486 CDD:279162
CRIB 1544..1580 CDD:238077
rock1XP_002934180.3 STKc_ROCK1 2..406 CDD:270772 179/392 (46%)
Smc <424..1107 CDD:224117 134/735 (18%)
HR1_ROCK1 491..556 CDD:212029 12/65 (18%)
ROCK_SBD 838..918 CDD:409019 20/95 (21%)
PH_ROCK 1125..1231 CDD:269948 32/84 (38%)
C1_ROCK1 1228..1296 CDD:410424
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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