DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gek and rock2

DIOPT Version :9

Sequence 1:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster
Sequence 2:XP_004914525.1 Gene:rock2 / 100493965 XenbaseID:XB-GENE-959451 Length:1399 Species:Xenopus tropicalis


Alignment Length:1347 Identity:388/1347 - (28%)
Similarity:609/1347 - (45%) Gaps:315/1347 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TTGSC-KKRLTFLKCILSDTTSDQKWAAEFGEDTEGHQFSLDYLLDTFIVLYDECSNSSLRREKG 75
            |...| ..|...|:.||.|..|               ..:::.|||....:..:....:||:.|.
 Frog     4 TQEECMNSRRQTLEAILRDPRS---------------PINVEGLLDGLNSIVLDLDFPALRKNKN 53

  Fly    76 VSDFLKLSKPFVHIVRKLRLSRDDFDILKIIGRGAFGEVCVVQMISTEKVYAMKILNKWEMLKRA 140
            :.:||...:..|..||||::..:|:|::|:|||||||||.:|:...::||||||:|:|:||:||:
 Frog    54 IDNFLNRYEKIVREVRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKGSQKVYAMKLLSKFEMIKRS 118

  Fly   141 ETACFREERDVLVFGDRQWITNLHYAFQDNINLYLVMDYYCGGDLLTLLSKFEDKLPEDMAKFYI 205
            ::|.|.||||::.|.:..|:..|..||||..:||:||:|..||||:.|:|.::  :||..||||.
 Frog   119 DSAFFWEERDIMAFANSPWVVQLFCAFQDEKHLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFYT 181

  Fly   206 TEMILAINSIHQIRYVHRDIKPDNVLLDKRGHVRLADFGSCLRLDKDGTVQSNVAVGTPDYISPE 270
            .|::||:|:||.:..:|||:||||:||||.||::|||||:|:::|:.|.|:.:.|||||||||||
 Frog   182 AEVVLALNAIHSMGLIHRDVKPDNMLLDKYGHLKLADFGTCMKMDQTGMVRCDTAVGTPDYISPE 246

  Fly   271 ILRAMEDGKGRYGTECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNCFNLPSQETLNYK 335
            :|:: :.|.|.||.||||||:||.::|||.|:|||||:|||.||.|||:|:|..|.|.    :.:
 Frog   247 VLKS-QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE----DVE 306

  Fly   336 VSETSQDLLCKLICIPENRLGQNGIQDFMDHPWFVG--IDWKNIRQGPAPYVPEVSSPTDTSNFD 398
            :|..:::|:|..:...|.|||:|||:|...||:|..  .:|.|||:..||.|||::|..||||||
 Frog   307 ISVHAKNLICAFLTDREVRLGRNGIEDIKQHPFFKNDQWNWDNIRETVAPVVPELASDIDTSNFD 371

  Fly   399 VDDNDVRLTDSIPPSANP-AFSGFHLPFIGFTF----SLTSSSTLDSKKNQSSGFGDDTLDTISS 458
            ..::|....::.|   || ||:|..|||||||:    .|.|.|:.:.|:..||.           
 Frog   372 DIEDDKGDAETFP---NPKAFAGNQLPFIGFTYYRENLLLSESSRNCKEKNSSA----------- 422

  Fly   459 PQLAILPSNNSETPVDSVQLKALNDQLAALKQEKAELSKQHNEVFERLKTQDSELQDAISQRNIA 523
                 .|.......:..| :..|.:||....|.|.||.::...|..||:....||.:..:.|   
 Frog   423 -----QPMKEQSAHLQKV-INKLEEQLHNEMQTKDELEQKFRAVNLRLEKTVKELDEEANAR--- 478

  Fly   524 MMEYSEVTEKLSELRNQKQKLSRQVRDKEEELDGAMQKNDSLRNELRKSDKTRRELELHIEDAVI 588
                ..:.....:|..:|..|..:..:.:.:.:....:..||.||:........:|:...:::.|
 Frog   479 ----KSIESTTRQLEREKALLQHKSTEYQRKAENDADRKRSLENEVNSLKDQLEDLKRRNQNSQI 539

  Fly   589 EAAKEKKLREHAEDCCRQLQME------LRKGSSSVETTMPLSISSEMSSYEIERLELQFSEKLS 647
            ...|..:|:...::...||:.|      |||            ..:|||. :|::||        
 Frog   540 SNEKMNQLQRQLDEANAQLRTESDAAARLRK------------TQTEMSK-QIQQLE-------- 583

  Fly   648 HQQTRHNMELEALREQFSELENANLALTKELQQTQ-----ERLKYTQMESITDSAE---TLLE-- 702
                .:|.||:   ::...||||.|.|.|:....|     ||...||...:....:   ::||  
 Frog   584 ----TNNRELQ---DKTCMLENAKLKLEKDFINLQSALESERRDRTQGSEVISDLQGRISVLEED 641

  Fly   703 LKKQHDL------EKSSWFE-----EKQRLSSEVNLKSKSLKELQ-----------------AED 739
            |||..:|      ||....|     ||::.:.|:::..| ||.||                 |:.
 Frog   642 LKKGKELLARAEAEKQQMHEGLAILEKEKSNLEIDMTYK-LKALQQSVEKEEAEHKATKARLADK 705

  Fly   740 DEIFKEL-RMKREAITLWERQMAE---IIQWVS---------------DEKDAR---GYLQALAT 782
            ::|::.: ..|.||:...|:::.|   :.|.:.               |.|.|:   ..|::|..
 Frog   706 NKIYQSIEETKSEAMKDMEKKLHEERLVKQRLENSLLETEKQYSMLDCDLKQAKQKINELESLKD 770

  Fly   783 KMTEELEYLKHVGTFNNNGVDNKNWRNRRSQKLDKMELLNLQSALQREIQAKNMI---------- 837
            |::|:::.|    |........|  ||.....| ||::..:.|....|.|.|..|          
 Frog   771 KLSEDVKNL----TLKAEQEAQK--RNLTHNDL-KMQIQQVNSLKMSEKQLKQEINHLTEIKLNL 828

  Fly   838 ---SDELSQTRSDLISTQKEVRDY--KKRYDSILH-------------------DFQKKETELRD 878
               ::||.:.|.|.....||::|.  .::|.|.|:                   :.|:|..||:|
 Frog   829 EKQNNELRKERVDADGQMKELQDQLEAEQYFSTLYKTQVRELKEECEDKSKMCKEVQQKVQELQD 893

  Fly   879 LQKGGLEYSESFLNKSTHHGLSSAF----FRDMSKNS-----EIIDSAESFGNESGDNF-TPNFF 933
            .:.......|..|.|:....|:.:.    :.|:.|..     ||.:.......|..:.: |....
 Frog   894 ERDSLAAQLEITLTKADSEQLARSIAEEQYSDLEKEKIMKELEIKEMMARHKQELAEKYATIASL 958

  Fly   934 QSGNSGMLF---NYEPKYAGKNNKDHSSMKEAS--VSDLSREESD----------QLVKESQKKV 983
            :..|..:..   |...:....|||    :||..  :.:|..|||.          ||:.|...|.
 Frog   959 EEANKTLTIDVGNLANEKEDLNNK----LKETQELIQNLKEEESSIITVKAQFEKQLLTERTLKT 1019

  Fly   984 PGNTAIHQFLVRTFSSPTK--------------------------------------CNHCTSLM 1010
            .....:.:.:.|..  |||                                      .|...:|:
 Frog  1020 QAVNKLAEIMNRKL--PTKRGPDTDVRRKEKENRKLQLDLKSEREKFSQLVFKYQREVNDMQALI 1082

  Fly  1011 VGLTRQGVVCEICGFACHTICCQKVPTTCPVPMDQTKRP-----LGIDPTRGIGTAY-------- 1062
            ....:..|  |:          |....:....::|.:..     ||:|.| .||:.:        
 Frog  1083 ADENQARV--EL----------QMALDSKDSDIEQLRSQLQSMNLGLDST-SIGSGHGDTDADDG 1134

  Fly  1063 ------EGYVKVPKSGVIKRGWIRQFVVVCDFKLFLYDISPDR-CALPSVSVSQVLDMRDPEFSV 1120
                  ||::.:|.....|.||.:::|||...|:..||...|: .:.||:    |||: |..|.|
 Frog  1135 FPESRLEGWLSLPLRNAKKFGWNKKYVVVSSRKILFYDSEQDKELSNPSM----VLDI-DKLFHV 1194

  Fly  1121 GSVRESDVIHAAKKDVPCIFKIKTALIDGGLSLNTLMLADNESEKSK 1167
            ..|.::||..|..|::|.||:|               |..||.|..|
 Frog  1195 RPVTQTDVYRADAKEIPRIFQI---------------LYANEGESKK 1226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 171/334 (51%)
S_TKc 100..369 CDD:214567 140/268 (52%)
KELK 478..556 CDD:292424 16/77 (21%)
CEP63 492..749 CDD:293650 66/301 (22%)
CEP63 652..880 CDD:293650 75/321 (23%)
C1_1 990..1040 CDD:278556 9/87 (10%)
PH_MRCK 1049..1182 CDD:269949 41/139 (29%)
CNH 1211..1486 CDD:279162
CRIB 1544..1580 CDD:238077
rock2XP_004914525.1 STKc_ROCK2 25..403 CDD:270771 186/402 (46%)
S_TKc 78..340 CDD:214567 140/268 (52%)
Smc <432..1113 CDD:224117 147/742 (20%)
HR1_ROCK2 492..558 CDD:212028 10/65 (15%)
Rho_Binding 966..1032 CDD:286056 14/69 (20%)
PH_ROCK 1138..1242 CDD:269948 35/109 (32%)
C1 1246..1292 CDD:237996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D759391at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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