DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gek and dmpk

DIOPT Version :9

Sequence 1:NP_523837.2 Gene:gek / 37858 FlyBaseID:FBgn0023081 Length:1637 Species:Drosophila melanogaster
Sequence 2:XP_004917016.2 Gene:dmpk / 100491375 XenbaseID:XB-GENE-949801 Length:587 Species:Xenopus tropicalis


Alignment Length:570 Identity:239/570 - (41%)
Similarity:345/570 - (60%) Gaps:72/570 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EGHQF-----SLDYLLDTFIVLYDECSNSSLRREKGVSDFLKLSKPFVHIVRKLRLSRDDFDILK 104
            ||.|.     :||.|||..:.:.:|.:.|.|.:|..:::||..:.|...::|:.|:.|.||||||
 Frog     2 EGTQLPPVPQALDALLDLMLCVCNELATSPLAQETHIAEFLSWADPLAQLIREQRMKRSDFDILK 66

  Fly   105 IIGRGAFGEVCVVQMISTEKVYAMKILNKWEMLKRAETACFREERDVLVFGDRQWITNLHYAFQD 169
            :||||||.||.||:..|..:||||||:|||::|||::.||:|:||||||.||::|||.||:||||
 Frog    67 VIGRGAFSEVAVVRKKSNSQVYAMKIMNKWDLLKRSDVACYRQERDVLVNGDKRWITQLHFAFQD 131

  Fly   170 NINLYLVMDYYCGGDLLTLLSKFEDKLPEDMAKFYITEMILAINSIHQIRYVHRDIKPDNVLLDK 234
            :..|||:||||.|||||:|||||.|..|..||.||:.||::||:|:|.:.:|||||||||:||:.
 Frog   132 DNYLYLIMDYYVGGDLLSLLSKFSDGFPSHMAVFYLAEMVMAISSVHSLGFVHRDIKPDNMLLNC 196

  Fly   235 RGHVRLADFGSCLRLDKDGTVQSNVAVGTPDYISPEILRAMEDGKGRYGTECDWWSLGVCMYEML 299
            .||:||.||||||:|..||||.|::|||||||:|||||.|:||....||.||||||||||.|||.
 Frog   197 AGHIRLGDFGSCLKLRGDGTVSSSIAVGTPDYLSPEILLAVEDPTLCYGVECDWWSLGVCAYEMY 261

  Fly   300 YGETPFYAESLVETYGKIMNHQNCFNLPSQETLNYKVSETSQDLLCKLICIPENRLGQNGIQDFM 364
            :|.|||||:.:|||||||::.:..|..|...:   :||..:...:..|||..|.|||:.|:|||.
 Frog   262 FGYTPFYADLVVETYGKIIHFKEHFIFPPSSS---EVSSEALSFISSLICDRETRLGRGGLQDFQ 323

  Fly   365 DHPWFVGIDWKNIRQGPAPYVPEVSSPTDTSNFDVDDNDVR------------LTDSIPPSANPA 417
            .||.|.||:|:.:.....|||||....|||||||:.::.:.            :.||.|      
 Frog   324 MHPLFAGIEWERLMDSIPPYVPESEGATDTSNFDMVEDQLSEMVSGGGETLSDVGDSSP------ 382

  Fly   418 FSGFHLPFIGFTFSL----------TSSSTLDSKKN-----QSSGFGDDTLDTISSPQLAILPSN 467
             .|.||||:|:::::          |..:..|.|:.     |:...|    ||:::|..::|.|:
 Frog   383 -LGVHLPFVGYSYTVREDDREHVWGTLKNECDCKRGLVPNPQNITHG----DTVAAPFESMLLSD 442

  Fly   468 NSETPVDSVQL-KALNDQLAALKQEKAELSKQHNEVFERLKTQDSELQDAISQRNIAMMEYSEVT 531
            ........:|. ::|:.:::.||.....|:.:.||.    ...:||||                 
 Frog   443 QQNALESEIQTQESLSTEISLLKSTNQHLASRLNEA----DLLNSELQ----------------- 486

  Fly   532 EKLSELRNQKQKLSRQVRDKEEELDGA-MQKNDSLRNELRKSDKTRRELE 580
               |::|..::||..:.:::||..:.. :.:...:.||..::....|:|:
 Frog   487 ---SKIRTLEEKLREKEKEEEERREEVFVPRRWEVCNEKFETTSRNRQLD 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gekNP_523837.2 STKc_DMPK_like 98..430 CDD:270748 190/343 (55%)
S_TKc 100..369 CDD:214567 164/268 (61%)
KELK 478..556 CDD:292424 16/78 (21%)
CEP63 492..749 CDD:293650 17/90 (19%)
CEP63 652..880 CDD:293650
C1_1 990..1040 CDD:278556
PH_MRCK 1049..1182 CDD:269949
CNH 1211..1486 CDD:279162
CRIB 1544..1580 CDD:238077
dmpkXP_004917016.2 PKc_like 60..395 CDD:419665 190/344 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D117302at33208
OrthoFinder 1 1.000 - - FOG0001346
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22988
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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