DRSC/TRiP Functional Genomics Resources

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Protein Alignment snama and zgc:174354

DIOPT Version :10

Sequence 1:NP_611884.1 Gene:snama / 37857 FlyBaseID:FBgn0086129 Length:1231 Species:Drosophila melanogaster
Sequence 2:XP_073771990.1 Gene:zgc:174354 / 555814 ZFINID:ZDB-GENE-080218-8 Length:278 Species:Danio rerio


Alignment Length:232 Identity:79/232 - (34%)
Similarity:132/232 - (56%) Gaps:44/232 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDFDLQITNAQSKEEYKDDGFLIPKN 67
            |||:|:|.|.:|::.|:||:|:||:|||:|::::|| |..  .|:|:..|:.|||.||..|||||
Zfish     4 VHYRFQSRLTYDSLQFEGLNITVGELKRQIMRRERL-KFC--QLKISKGQTDEEYTDDDALIPKN 65

  Fly    68 TTLIISRIP-----------IAHPTKKGWEPPAAENAFSAAPA--------KQDNFNMDLSKMQG 113
            |::||.|:|           :.|..     .|:|:::.:...:        |.:|    |::.:.
Zfish    66 TSVIIRRVPAAGLKSSNRRFVGHQA-----GPSAKSSQTGDSSLLSLEQLLKTEN----LAEAKA 121

  Fly   114 TEEDKIQAMMMQSTVDYDPKTYHRIKGQSQVGEVPASYRCNKCKKSGHWIKNCPFVGGKD---QQ 175
            :||||::|:|.||::.|    |...:..:.:|.:|.:|.|..|...||.|::||..||..   .:
Zfish   122 SEEDKLKAVMYQSSLCY----YSSSEAMTLLGLLPPNYVCFHCGIPGHHIRHCPSKGGSSSAPHK 182

  Fly   176 EVKRNTGIPRSFR---DKPD---AAENESADFVLPAV 206
            .::|:|||||||.   |.|:   ...:.|..:|:|.:
Zfish   183 RIRRSTGIPRSFLLEVDDPNRKGVMMDGSGKYVIPII 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snamaNP_611884.1 COG5222 3..315 CDD:227547 79/232 (34%)
PTZ00449 <560..>778 CDD:185628
PRK12678 <1031..>1121 CDD:237171
zgc:174354XP_073771990.1 None
Blue background indicates that the domain is not in the aligned region.

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