Sequence 1: | NP_611884.1 | Gene: | snama / 37857 | FlyBaseID: | FBgn0086129 | Length: | 1231 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017445711.1 | Gene: | Rbbp6 / 308968 | RGDID: | 1311964 | Length: | 1827 | Species: | Rattus norvegicus |
Alignment Length: | 1854 | Identity: | 431/1854 - (23%) |
---|---|---|---|
Similarity: | 661/1854 - (35%) | Gaps: | 696/1854 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDFDLQITNAQSKEEYKDDGFLIPKN 67
Fly 68 TTLIISRIPI--AHPTKKGW-----EP-----PAAENAFSAAPAKQDNFNMDLSKMQGTEEDKIQ 120
Fly 121 AMMMQSTVDYDPKTYHRIKGQSQVGEVPASYRCNKCKKSGHWIKNCPFVGGKDQQ---EVKRNTG 182
Fly 183 IPRSF------------------------------------------------------------ 187
Fly 188 ------------RDKPDAAENESADFVLPAVQNQE---IPEDLICGICRDIFVDAVMIPCCGSSF 237
Fly 238 CDDCVRTSLLESEDSECPDCKEKNCSPGSLIPNRFLRNSVNAFKNETGYNK-------------S 289
Fly 290 AAKPAAVKNEE---KPPVEKEVEKK--PV----AEVEPEETEVKPEKQKESETNGSNPPKSESPE 345
Fly 346 PPATTEPS-QKEKDKYDSDYEDNITIKMPQPAADS------------------------------ 379
Fly 380 ------------TTVPSKRS--------PSYSHRSESSH---------RRDRSDYVSDHDHKH-- 413
Fly 414 QRPSKSESVNKDRSLLPLPIGTLPSYQGHMMAESEEARRSSAYKPPY-MQMQRGPPPMHMMSHHM 477
Fly 478 PAYNNGFNNMGQRPPLSYVPYQNQSVHPMRAPYGSAGGGMNMNMSQPFQSPNLASIYQGVAAKVG 542
Fly 543 SGPIDDPLEAF---NRIMKEKERK--KVDRF-----------RSSDRHRSRSPDRQRHRFKSPMY 591
Fly 592 EKDN-----SRDNLKDKRPRSRERKREH--SYERHIRHPRSSRQPNDGSKSPGGRIKRSGHRRSA 649
Fly 650 SPKPGYK---------SDYRDKPYNKPSAPKTEAV--------EPPPP---------------GF 682
Fly 683 E-------------------------------------------PLQLTD--------ED----- 691
Fly 692 GYRNK--------------------HPTSSEASQSS-----KGDSSKK-----RGENRHE----- 721
Fly 722 --EAPRKRHRSRSISK--------------------EPKPNDS-NYRSLTPPAK--ITTPKMTAA 761
Fly 762 QLRQ---------------------------RESSPK---------------------------- 771
Fly 772 ---TPEKSHDDYLTAKARIMASQPVINDTEMETNVGKENKAKSPLSKDRKKKKKDKDKAERKKNK 833
Fly 834 KDKRAKKEK-----------------------------GDRQK--------KSSS---------V 852
Fly 853 NR-SDSDINNSSLMNESNYKVLSPRAQSPSIEINAAQL--------------------------- 889
Fly 890 --SPTHNATENVNPKSHSILTVGAASDDNLGPRSKLSEANSVNLSKWEIDENILGLEDSSK---- 948
Fly 949 -KAAGASDDPSEITSDVLRK---------AENAIFAKAINAIRPMEFQVIINSKDNSKDRSVVRS 1003
Fly 1004 DKDRSSSPRRNNSSRSVKDRLGTKISNDRSRSRDK-------------SKGRRRAAR------SS 1049
Fly 1050 DDDANRGRS--------DRHGSRKRDNRS---RDRAAP-----------SEKRQERSYKR----- 1087
Fly 1088 ----SSPEDDKLRRQNKEQSESKHG-----KHDQNNSDDSDRRAA---KNTKSSDSRVVSSVTAV 1140
Fly 1141 VAPPKPCRPDNPFRK----------------------------------------FVDTSSSSSL 1165
Fly 1166 VVKYDNTIQ------KEGA------------SSDNGMEHRKQRD--------------KKLKKH- 1197
Fly 1198 SKYSSTDSLKSEKRKDPKSKKKSKILKKKKKSKK 1231 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snama | NP_611884.1 | COG5222 | 3..315 | CDD:227547 | 154/423 (36%) |
DWNN | 3..75 | CDD:285936 | 45/71 (63%) | ||
zf-CCHC_2 | 148..167 | CDD:290419 | 11/18 (61%) | ||
RING | 217..260 | CDD:238093 | 26/42 (62%) | ||
Rbbp6 | XP_017445711.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 100 | 1.000 | Domainoid score | I6848 |
eggNOG | 1 | 0.900 | - | - | E1_COG5222 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 312 | 1.000 | Inparanoid score | I2507 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000125 | |
OrthoInspector | 1 | 1.000 | - | - | oto96568 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR15439 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
9 | 9.010 |