DRSC/TRiP Functional Genomics Resources

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Protein Alignment snama and LOC110438903

DIOPT Version :9

Sequence 1:NP_611884.1 Gene:snama / 37857 FlyBaseID:FBgn0086129 Length:1231 Species:Drosophila melanogaster
Sequence 2:XP_021328122.1 Gene:LOC110438903 / 110438903 -ID:- Length:278 Species:Danio rerio


Alignment Length:232 Identity:80/232 - (34%)
Similarity:133/232 - (57%) Gaps:44/232 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDFDLQITNAQSKEEYKDDGFLIPKN 67
            |||:|:|.|.:|::.|:||:|:||:|||:|::::|| |..  .|:|:.||:.|||.||..|||||
Zfish     4 VHYRFQSRLTYDSLQFEGLNITVGELKRQIMRRERL-KFC--QLKISKAQTDEEYTDDDALIPKN 65

  Fly    68 TTLIISRIP-----------IAHPTKKGWEPPAAENAFSAAPA--------KQDNFNMDLSKMQG 113
            |::||.|:|           :.|..     .|:|:::.:...:        |.:|    |::.:.
Zfish    66 TSVIIRRVPAAGLKSSNRRFVGHQA-----GPSAKSSQTGDSSLLSLEQLLKTEN----LAEAKA 121

  Fly   114 TEEDKIQAMMMQSTVDYDPKTYHRIKGQSQVGEVPASYRCNKCKKSGHWIKNCPFVGGK---DQQ 175
            :||||::|:|.||::.|    |...:..:.:|.:|.:|.|..|...||.|::||..||.   ..:
Zfish   122 SEEDKLKAVMYQSSLCY----YSSSEAMTLLGLLPPNYVCFHCGIPGHHIRHCPSKGGSSSASHK 182

  Fly   176 EVKRNTGIPRSFR---DKPD---AAENESADFVLPAV 206
            .::|:|||||||.   |.|:   ...:.|..:|:|.:
Zfish   183 RIRRSTGIPRSFLLEVDDPNRKGVMMDGSGKYVIPII 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snamaNP_611884.1 COG5222 3..315 CDD:227547 80/232 (34%)
DWNN 3..75 CDD:285936 37/71 (52%)
zf-CCHC_2 148..167 CDD:290419 7/18 (39%)
RING 217..260 CDD:238093
LOC110438903XP_021328122.1 DWNN 2..>231 CDD:331509 80/232 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000125
OrthoInspector 1 1.000 - - otm24600
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X138
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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