DRSC/TRiP Functional Genomics Resources

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Protein Alignment snama and LOC100536005

DIOPT Version :10

Sequence 1:NP_611884.1 Gene:snama / 37857 FlyBaseID:FBgn0086129 Length:1231 Species:Drosophila melanogaster
Sequence 2:NP_001373495.1 Gene:LOC100536005 / 100536005 -ID:- Length:173 Species:Danio rerio


Alignment Length:140 Identity:56/140 - (40%)
Similarity:86/140 - (61%) Gaps:18/140 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDF-DLQITNAQSKEEYKDDGFLIPK 66
            |||:|:|.|.:|::.|:||:||.|:|||:|::.|||    .| .|:|:|||:.|||.||. ||.|
Zfish     4 VHYRFQSRLTYDSLQFEGLNISAGELKRQIMRSKRL----KFCQLKISNAQTDEEYTDDA-LISK 63

  Fly    67 NTTLIISRIP-----------IAHPTKKGWEPPAAENAFSAAPAKQDNFNMDLSKMQGTEEDKIQ 120
            ||::||.|||           :.|...: |..|:.....|....:|.....:|::.:.:||||::
Zfish    64 NTSVIIRRIPAAGLKSSNRRFVGHQAGR-WREPSPRADPSLLSLEQLLKTENLAEAKASEEDKLK 127

  Fly   121 AMMMQSTVDY 130
            |:|.||::.|
Zfish   128 AVMYQSSLCY 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snamaNP_611884.1 COG5222 3..315 CDD:227547 56/140 (40%)
PTZ00449 <560..>778 CDD:185628
PRK12678 <1031..>1121 CDD:237171
LOC100536005NP_001373495.1 DWNN 4..73 CDD:462603 39/73 (53%)
Blue background indicates that the domain is not in the aligned region.

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