DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snama and LOC100333095

DIOPT Version :10

Sequence 1:NP_611884.1 Gene:snama / 37857 FlyBaseID:FBgn0086129 Length:1231 Species:Drosophila melanogaster
Sequence 2:XP_073766961.1 Gene:LOC100333095 / 100333095 -ID:- Length:265 Species:Danio rerio


Alignment Length:225 Identity:80/225 - (35%)
Similarity:125/225 - (55%) Gaps:43/225 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDF-DLQITNAQSKEEYKDDGFLIPK 66
            |||:|:|.|.:|::.|:||:||.|:|||:|::.|||    .| .|:|:|||:.|||.||. ||||
Zfish     4 VHYRFQSRLTYDSLQFEGLNISAGELKRQIMRSKRL----KFCQLKISNAQTDEEYTDDA-LIPK 63

  Fly    67 NTTLIISRIP-----------IAHPTKKGWEPPAAENAFSAAPAKQDNFNMDLSKMQGTEEDKIQ 120
            ||::||.|||           :.|...: |..|:.....|....:|.....:|::.:.:||||::
Zfish    64 NTSVIIRRIPAAGLKSSNRRFVGHQAGR-WREPSPRADPSLLSLEQLLKTENLAEAKASEEDKLK 127

  Fly   121 AMMMQSTVDYDPKTYHRIKGQSQVGEVPASYRCNKCKKSGHWIKNCPF-VGGKD--QQEVKRNTG 182
            |:|.||::.|    |...:....:| :|           ||.|::||. ||.:.  .:.::::||
Zfish   128 AVMYQSSLCY----YSSSEAMRLLG-IP-----------GHHIRHCPTNVGSRSAPHKRIRKSTG 176

  Fly   183 IPRSFR---DKPD---AAENESADFVLPAV 206
            |||||.   |.||   ...:.|..:|:|.:
Zfish   177 IPRSFLLEVDDPDRKGVMIDGSGRYVIPII 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snamaNP_611884.1 COG5222 3..315 CDD:227547 80/225 (36%)
PTZ00449 <560..>778 CDD:185628
PRK12678 <1031..>1121 CDD:237171
LOC100333095XP_073766961.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.