DRSC/TRiP Functional Genomics Resources

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Protein Alignment snama and LOC100329825

DIOPT Version :9

Sequence 1:NP_611884.1 Gene:snama / 37857 FlyBaseID:FBgn0086129 Length:1231 Species:Drosophila melanogaster
Sequence 2:XP_009302375.1 Gene:LOC100329825 / 100329825 -ID:- Length:215 Species:Danio rerio


Alignment Length:222 Identity:63/222 - (28%)
Similarity:98/222 - (44%) Gaps:87/222 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDF-DLQITNAQSKEEYKDDGFLIPK 66
            |||:|:|.|.:|::.|:||:||.|:|||:|::.|||    .| .|:|:|||:.|||.||. ||||
Zfish     4 VHYRFQSRLTYDSLQFEGLNISAGELKRQIMRSKRL----KFCQLKISNAQTDEEYTDDA-LIPK 63

  Fly    67 NTTLIISRIP-----------IAHPTKKGWEPPAAENAFSAAPAKQDNFNMDLSKMQGTEEDKIQ 120
            ||::||.|||           :.|...: |..|:         .:.|...:.|.::         
Zfish    64 NTSVIIRRIPAAGLKSSNRRFVGHQAGR-WREPS---------PRADPSLLSLEQL--------- 109

  Fly   121 AMMMQSTVDYDPKTYHRIKGQSQVGEVPASYRCNKCKKSGHWIKNCPFVGGKDQQEVKRNTGIPR 185
                             :||.                      ::.|      .:.::::|||||
Zfish   110 -----------------LKGS----------------------RSAP------HKRIRKSTGIPR 129

  Fly   186 SFR---DKPD---AAENESADFVLPAV 206
            ||.   |.||   ...:.|..:|:|.:
Zfish   130 SFLLEVDDPDRKGVMIDGSGRYVIPII 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snamaNP_611884.1 COG5222 3..315 CDD:227547 63/222 (28%)
DWNN 3..75 CDD:285936 39/72 (54%)
zf-CCHC_2 148..167 CDD:290419 0/18 (0%)
RING 217..260 CDD:238093
LOC100329825XP_009302375.1 COG5222 2..>168 CDD:227547 63/222 (28%)
DWNN 4..72 CDD:400919 39/72 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5222
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000125
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X138
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.770

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