DRSC/TRiP Functional Genomics Resources

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Protein Alignment snama and zgc:173948

DIOPT Version :9

Sequence 1:NP_611884.1 Gene:snama / 37857 FlyBaseID:FBgn0086129 Length:1231 Species:Drosophila melanogaster
Sequence 2:NP_001103342.2 Gene:zgc:173948 / 100126146 ZFINID:ZDB-GENE-071004-114 Length:173 Species:Danio rerio


Alignment Length:144 Identity:59/144 - (40%)
Similarity:88/144 - (61%) Gaps:26/144 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDF-DLQITNAQSKEEYKDDGFLIPK 66
            |||:|:|.|.:|::.|:||:||.|:|||:|::.|||    .| .|:|:|||:.|||.||. ||||
Zfish     4 VHYRFQSRLTYDSLQFEGLNISAGELKRQIMRSKRL----KFCQLKISNAQTDEEYTDDA-LIPK 63

  Fly    67 NTTLIISRIP-----------IAHPTKKGW---EPPAAENAFSAAP-AKQDNFNMDLSKMQGTEE 116
            ||::||.|||           :.|...: |   .|.|..:..|... .|.:|    |::.:.:||
Zfish    64 NTSVIIRRIPAAGLKSSNRRFVGHQAGR-WRELSPRADPSLLSLEQLLKTEN----LAEAKASEE 123

  Fly   117 DKIQAMMMQSTVDY 130
            ||::|:|.||::.|
Zfish   124 DKLKAVMYQSSLCY 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snamaNP_611884.1 COG5222 3..315 CDD:227547 59/144 (41%)
DWNN 3..75 CDD:285936 39/72 (54%)
zf-CCHC_2 148..167 CDD:290419
RING 217..260 CDD:238093
zgc:173948NP_001103342.2 DWNN 4..72 CDD:285936 39/72 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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