DRSC/TRiP Functional Genomics Resources

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Protein Alignment snama and zgc:174353

DIOPT Version :10

Sequence 1:NP_611884.1 Gene:snama / 37857 FlyBaseID:FBgn0086129 Length:1231 Species:Drosophila melanogaster
Sequence 2:XP_068075522.1 Gene:zgc:174353 / 100004335 ZFINID:ZDB-GENE-071004-121 Length:278 Species:Danio rerio


Alignment Length:232 Identity:81/232 - (34%)
Similarity:134/232 - (57%) Gaps:44/232 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDFDLQITNAQSKEEYKDDGFLIPKN 67
            |||:|:|.|.:|::.|:||:|:||:|||:|::::|| |..  .|:|:.||:.|||.||..|||||
Zfish     4 VHYRFQSRLTYDSLQFEGLNITVGELKRQIMRRERL-KFC--QLKISKAQTDEEYTDDDALIPKN 65

  Fly    68 TTLIISRIP-----------IAHPTKKGWEPPAAENAFSAAPA--------KQDNFNMDLSKMQG 113
            |::||.|:|           :.|..     .|:|:::.:...:        |.:|    |::.:.
Zfish    66 TSVIIRRVPAAGLKSSNRRFVGHQA-----GPSAKSSQTGDSSLLSLEQLLKTEN----LAEAKA 121

  Fly   114 TEEDKIQAMMMQSTVDYDPKTYHRIKGQSQVGEVPASYRCNKCKKSGHWIKNCPFVGGK---DQQ 175
            :||||::|:|.||::.|    |...:..:.:|.:|.:|.|..|...||.|::||..||.   .|:
Zfish   122 SEEDKLKAVMYQSSLCY----YSSSEAMTLLGLLPPNYVCFHCGIPGHHIRHCPSKGGSSSASQK 182

  Fly   176 EVKRNTGIPRSFR---DKPD---AAENESADFVLPAV 206
            .::|:|||||||.   |.|:   ...:.|..:|:|.:
Zfish   183 RIRRSTGIPRSFLLEVDDPNRKGVMMDGSGKYVIPII 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snamaNP_611884.1 COG5222 3..315 CDD:227547 81/232 (35%)
PTZ00449 <560..>778 CDD:185628
PRK12678 <1031..>1121 CDD:237171
zgc:174353XP_068075522.1 COG5222 2..>231 CDD:227547 81/232 (35%)
Blue background indicates that the domain is not in the aligned region.

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