DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp60A and mical3b

DIOPT Version :10

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_073802548.1 Gene:mical3b / 566850 ZFINID:ZDB-GENE-050211-1 Length:1786 Species:Danio rerio


Alignment Length:241 Identity:50/241 - (20%)
Similarity:77/241 - (31%) Gaps:83/241 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PVETPKCPACGKSVYAAEERVAGGY------------KFHKTCFKCSMCNKALDSTNCTEHEKEL 57
            |.|||          .:|.:.:.|:            ||.:        |....||.....:..:
Zfish   697 PAETP----------GSEPKASEGHSKVRSMASLLLAKFEE--------NSPSPSTTAIRRQNYI 743

  Fly    58 FCKNCHGRKYGPKGYGFGGGAGCLSTDTGAHL-NREFVPPKIPPKAPDG--------LG----CP 109
                          :.:.||...|:......: :::...||:..:...|        :|    |.
Zfish   744 --------------HMYTGGVSSLALQIANQIQSQQAQAPKLLHRRESGSQKDLPVNVGSSDVCY 794

  Fly   110 RCGIYVYAAEQMLARGKGYHRRCFKCVQCNKTLD-STLHCDGPDKDIYCRGCY------------ 161
            .||..||..|::.|.||.:||.||:|..|:.|:. |....|......||:..:            
Zfish   795 FCGRRVYVMERLSAEGKFFHRSCFQCDHCSSTIRLSNYTYDQLHGKFYCKHHFSFRLASVAQRKR 859

  Fly   162 ---------AQKFGARGYGHIGISSLGLMSDIRDSEWQS----DMA 194
                     ||...|.......:||||.:.......|.|    |||
Zfish   860 PAPPVAPRPAQASLAASSASTSLSSLGSVGTATPDSWSSSTHTDMA 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 7/64 (11%)
LIM_CRP_like 108..161 CDD:188712 20/53 (38%)
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
mical3bXP_073802548.1 None
Blue background indicates that the domain is not in the aligned region.

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