DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlp60A and mical3a

DIOPT Version :10

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_073785932.1 Gene:mical3a / 402881 ZFINID:ZDB-GENE-050126-2 Length:2522 Species:Danio rerio


Alignment Length:184 Identity:50/184 - (27%)
Similarity:72/184 - (39%) Gaps:41/184 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VPVETPKCPACGKSVYAAEERVAGGYKFH----KTCFKCSMC-----NKALDSTNCTE-HEKELF 58
            ||:..|       |:....||:|..:|..    |:..|.|:.     ::|.|.::.:. |....|
Zfish   974 VPLHIP-------SIQERAERLASHFKDKPAKPKSKKKSSLLLTEQWSRARDVSSASPLHSPSSF 1031

  Fly    59 CKNCHGRKYGPKGYGFGGGAGCLSTDTGAHLNREFVPPKIPPKA---------PDGLG----CPR 110
            .::|      .|.|  .||...|:......|..:..|..:..|.         |..:|    |..
Zfish  1032 RQHC------VKMY--TGGVSSLAEQIANQLQAKDDPRPMLEKRDLGSFRKEFPQNIGGSDVCFF 1088

  Fly   111 CGIYVYAAEQMLARGKGYHRRCFKCVQCNKTLD-STLHCDGPDKDIYCRG--CY 161
            |...||..|::.|.||.:||.||||..|..||. |:...|..|...||:.  ||
Zfish  1089 CRKRVYVMERLSAEGKFFHRSCFKCDYCGTTLRLSSYAFDVEDGKFYCKPHYCY 1142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 12/62 (19%)
LIM_CRP_like 108..161 CDD:188712 22/55 (40%)
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
mical3aXP_073785932.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.