DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp60A and csrp2

DIOPT Version :10

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_957191.1 Gene:csrp2 / 393871 ZFINID:ZDB-GENE-040426-1863 Length:193 Species:Danio rerio


Alignment Length:175 Identity:78/175 - (44%)
Similarity:106/175 - (60%) Gaps:13/175 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KCPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNCTEHEKELFCKNCHGRKYGPKGYGF 74
            ||.||..:||.|||....|..|||.||.|.:|.|.||||....|::|::||:|:|:||||||||:
Zfish     9 KCCACNGTVYHAEEVQCDGKSFHKCCFLCMVCRKGLDSTTLAIHDQEIYCKSCYGKKYGPKGYGY 73

  Fly    75 GGGAGCLSTDTG---------AHLNREFV---PPKIPPKAPDGLGCPRCGIYVYAAEQMLARGKG 127
            |.|||.|:.|.|         .|.:|...   ..|...|......|.|||..|||||::::.||.
Zfish    74 GQGAGTLNMDRGERLGIKHEETHTHRPTTNTNTSKFAQKFGGSEKCARCGDAVYAAEKIMSAGKP 138

  Fly   128 YHRRCFKCVQCNKTLDSTLHCDGPDKDIYCRGCYAQKFGARGYGH 172
            :|:.||:|.:|.|:|:||...: .|.:|||:.|||:.||.:|.|:
Zfish   139 WHKNCFRCAKCGKSLESTTQTE-KDGEIYCKACYAKNFGPKGCGY 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 26/52 (50%)
LIM_CRP_like 108..161 CDD:188712 24/52 (46%)
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
csrp2NP_957191.1 LIM1_CRP2 9..63 CDD:188864 27/53 (51%)
LIM2_CRP2 119..172 CDD:188871 25/53 (47%)
Blue background indicates that the domain is not in the aligned region.

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