DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp60A and csrp1a

DIOPT Version :10

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_991130.1 Gene:csrp1a / 378726 ZFINID:ZDB-GENE-030909-4 Length:192 Species:Danio rerio


Alignment Length:175 Identity:82/175 - (46%)
Similarity:104/175 - (59%) Gaps:13/175 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KCPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNCTEHEKELFCKNCHGRKYGPKGYGF 74
            ||..|.|:||.|||....|..||::||.|.:|.|.||||....||.|::||.|:|:||||||||:
Zfish     8 KCGCCQKTVYFAEEVQCEGRSFHRSCFLCMVCRKNLDSTTVAVHENEIYCKACYGKKYGPKGYGY 72

  Fly    75 GGGAGCLSTDTGAHLNREFVPP------------KIPPKAPDGLGCPRCGIYVYAAEQMLARGKG 127
            |.|||.||.|.|..|..:.|.|            |...|......||||...|||||:::..|..
Zfish    73 GAGAGTLSMDKGESLGIKVVEPQNHQPTNNPNTSKFAQKFGGSDVCPRCSKAVYAAEKVIGAGNA 137

  Fly   128 YHRRCFKCVQCNKTLDSTLHCDGPDKDIYCRGCYAQKFGARGYGH 172
            :||.||:|..|.|.|:||...| .|.:|||:||||:.||.:|:|:
Zfish   138 WHRGCFRCAMCGKGLESTTLAD-KDGEIYCKGCYAKNFGPKGFGY 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 26/52 (50%)
LIM_CRP_like 108..161 CDD:188712 26/52 (50%)
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
csrp1aNP_991130.1 LIM1_CRP1 7..62 CDD:188863 27/53 (51%)
LIM2_CRP 118..171 CDD:188787 27/53 (51%)
Blue background indicates that the domain is not in the aligned region.

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