DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp60A and Mical1

DIOPT Version :9

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_038954550.1 Gene:Mical1 / 294520 RGDID:1309386 Length:1058 Species:Rattus norvegicus


Alignment Length:121 Identity:33/121 - (27%)
Similarity:37/121 - (30%) Gaps:46/121 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PFVPVETPK----------CPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNCTEHEKE 56
            |.||...|.          |..|||.:|..|.....|:.||:.||.|..|...|           
  Rat   662 PSVPPALPSEHEEAGAEDVCELCGKRLYILERFCVDGHFFHRGCFCCRTCEATL----------- 715

  Fly    57 LFCKNCHGRKYGPKGYGFGGGAG---CLSTDTGAHLNREFVPPKIPPKAPDGLGCP 109
                       .|.|||...|.|   ||.     ||      |:...|..|..|.|
  Rat   716 -----------RPGGYGQYPGDGYFYCLQ-----HL------PQEDQKEADNNGSP 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 14/62 (23%)
LIM_CRP_like 108..161 CDD:188712 1/2 (50%)
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
Mical1XP_038954550.1 FAD_binding_3 85..>122 CDD:396193
CH_MICAL1 506..611 CDD:409045
LIM 681..734 CDD:413332 22/79 (28%)
DUF3585 929..1056 CDD:403377
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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