DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp60A and Mical1

DIOPT Version :10

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_006512633.1 Gene:Mical1 / 171580 MGIID:2385847 Length:1207 Species:Mus musculus


Alignment Length:133 Identity:31/133 - (23%)
Similarity:39/133 - (29%) Gaps:56/133 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PFVPVETPK------------CPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNCTEHE 54
            |.:...||:            |..|||.:|..|.....|:.||::||.|..|...|         
Mouse   821 PSMSPNTPELSEHQEAGAEELCELCGKHLYILERFCVDGHFFHRSCFCCHTCEATL--------- 876

  Fly    55 KELFCKNCHGRKYGPKGYGFGGGAG---CL---------STDTGAHLNREFVP----------PK 97
                         .|.|||...|.|   ||         ..|....|..:.:|          |.
Mouse   877 -------------WPGGYGQHPGDGHFYCLQHLPQEDQKEADNNGSLESQELPTPGDSNMQPDPS 928

  Fly    98 IPP 100
            .||
Mouse   929 SPP 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 14/64 (22%)
LIM_CRP_like 108..161 CDD:188712
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
Mical1XP_006512633.1 UbiH 242..>379 CDD:440419
CH_MICAL1 665..770 CDD:409045
LIM_Mical_like 842..895 CDD:188744 22/74 (30%)
bMERB_dom 1080..1205 CDD:463467
Blue background indicates that the domain is not in the aligned region.

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