DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp60A and CSRP1

DIOPT Version :9

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001180500.1 Gene:CSRP1 / 1465 HGNCID:2469 Length:193 Species:Homo sapiens


Alignment Length:174 Identity:84/174 - (48%)
Similarity:109/174 - (62%) Gaps:13/174 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KCPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNCTEHEKELFCKNCHGRKYGPKGYGF 74
            ||..|.|:||.|||....|..|||:||.|.:|.|.||||....|.:|::||:|:|:||||||||:
Human     9 KCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGY 73

  Fly    75 GGGAGCLSTDTGAHL--NREFVPPKIPPKAPDG------LG----CPRCGIYVYAAEQMLARGKG 127
            |.|||.||||.|..|  ..|..|...|...|:.      :|    ||||...|||||:::..||.
Human    74 GQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQKIGGSERCPRCSQAVYAAEKVIGAGKS 138

  Fly   128 YHRRCFKCVQCNKTLDSTLHCDGPDKDIYCRGCYAQKFGARGYG 171
            :|:.||:|.:|.|.|:||...| .|.:|||:||||:.||.:|:|
Human   139 WHKACFRCAKCGKGLESTTLAD-KDGEIYCKGCYAKNFGPKGFG 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 26/52 (50%)
LIM_CRP_like 108..161 CDD:188712 26/52 (50%)
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
CSRP1NP_001180500.1 LIM1_CRP1 8..63 CDD:188863 27/53 (51%)
Nuclear localization signal. /evidence=ECO:0000255 64..69 3/4 (75%)
LIM2_CRP 119..172 CDD:188787 27/53 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142492
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1214165at2759
OrthoFinder 1 1.000 - - FOG0000284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4662
SonicParanoid 1 1.000 - - X318
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.880

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