DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlp60A and Csrp3

DIOPT Version :10

Sequence 1:NP_001137750.1 Gene:Mlp60A / 37853 FlyBaseID:FBgn0259209 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_038836.1 Gene:Csrp3 / 13009 MGIID:1330824 Length:194 Species:Mus musculus


Alignment Length:180 Identity:90/180 - (50%)
Similarity:111/180 - (61%) Gaps:14/180 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KCPACGKSVYAAEERVAGGYKFHKTCFKCSMCNKALDSTNCTEHEKELFCKNCHGRKYGPKGYGF 74
            ||.||.|:||.|||....|..||||||.|..|.||||||....||.|::||.|:||:|||||.||
Mouse     9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGF 73

  Fly    75 GGGAGCLSTDTGAHLNREFV-------------PPKIPPKAPDGLGCPRCGIYVYAAEQMLARGK 126
            |.||||||||||.||..:|.             |.|...|..:...|||||..|||||:::..||
Mouse    74 GQGAGCLSTDTGEHLGLQFQQSPKPARAATTSNPSKFSAKFGESEKCPRCGKSVYAAEKVMGGGK 138

  Fly   127 GYHRRCFKCVQCNKTLDSTLHCDGPDKDIYCRGCYAQKFGARGYGHIGIS 176
            .:|:.||:|..|.|:|:||...| .|.::||:.|||:.||..|.|..|::
Mouse   139 PWHKTCFRCAICGKSLESTNVTD-KDGELYCKVCYAKNFGPTGIGFGGLT 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlp60ANP_001137750.1 LIM1_MLP84B_like 10..63 CDD:188788 30/52 (58%)
LIM_CRP_like 108..161 CDD:188712 25/52 (48%)
LIM_CRP_like 213..266 CDD:188712
LIM 316..369 CDD:413332
LIM_CRP_like 412..465 CDD:188712
Csrp3NP_038836.1 Interaction with TCAP. /evidence=ECO:0000250|UniProtKB:P50461 1..5
LIM1_CRP3 9..62 CDD:188865 30/52 (58%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P50463, ECO:0000255 64..69 3/4 (75%)
Interaction with CLF2. /evidence=ECO:0000250|UniProtKB:P50461 94..105 0/10 (0%)
LIM2_CRP3 120..173 CDD:188866 26/53 (49%)
Blue background indicates that the domain is not in the aligned region.

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