DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and plsC

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_417490.1 Gene:plsC / 947496 ECOCYCID:EG11377 Length:245 Species:Escherichia coli


Alignment Length:187 Identity:45/187 - (24%)
Similarity:70/187 - (37%) Gaps:41/187 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 YSLVVWLTVCTAAVGYLKDGPFKRDLVH-KVLGMCFGVLSSAISAVITYHNEDNRPSSG--ICVA 332
            ||::    ||.....|....|  |:..| ...|..||.|:......:......:..|.|  |.:|
E. coli    13 YSIL----VCVFGSIYCLFSP--RNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIA 71

  Fly   333 NHTSPIDVLV---LMCDSTYSLIGQRH---GGFLGVLQRALARASPHIWFERGEAKDRHLVAERL 391
            ||.:..|::.   ::...|.: :|::.   ..|.|.|          .|.......||:   .|.
E. coli    72 NHQNNYDMVTASNIVQPPTVT-VGKKSLLWIPFFGQL----------YWLTGNLLIDRN---NRT 122

  Fly   392 KQH--VSDPNNP------PILIFPEGTCINNTSVMQFKKGSFE----VGGVIYPVAI 436
            |.|  :::..|.      .|.:|||||......::.||.|:|.    .|..|.||.:
E. coli   123 KAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCV 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 34/150 (23%)
plsCNP_417490.1 PRK15018 1..245 CDD:184979 45/187 (24%)

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