DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpat4 and AT1G80950

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_565249.1 Gene:AT1G80950 / 844435 AraportID:AT1G80950 Length:398 Species:Arabidopsis thaliana


Alignment Length:195 Identity:58/195 - (29%)
Similarity:99/195 - (50%) Gaps:22/195 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 EDNRPSSGICVANHTSPIDVLVLMCDSTYSLIGQRHGG---FLGVLQRALARASPHIWFERGEAK 382
            |..||  |..|:||.|.:|:|..|..|..|.:.:|..|   .:|::.:.|.    .::.:| |||
plant   183 EPERP--GAIVSNHVSYLDILYHMSASFPSFVAKRSVGKLPLVGLISKCLG----CVYVQR-EAK 240

  Fly   383 DRHL------VAERLKQHVSDPNNPPILIFPEGTCINNTSVMQFKKGSFEVGGVIYPVAIKYD-P 440
            ....      |.||:::..|:.:.|.|::|||||..|...::.||.|:|..|..:.||.:||. .
plant   241 SPDFKGVSGTVNERVREAHSNKSAPTIMLFPEGTTTNGDYLLTFKTGAFLAGTPVLPVILKYPYE 305

  Fly   441 RFGDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMY--RQEGESAIDFANRVKSVIAKQGGLI 503
            ||..| |::  .|..:::..::.......:|..||..|  ::|.:....:|:.|:.::|.:|.||
plant   306 RFSVA-WDT--ISGARHILFLLCQVVNHLEVIRLPVYYPSQEEKDDPKLYASNVRKLMATEGNLI 367

  Fly   504  503
            plant   368  367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 58/195 (30%)
AT1G80950NP_565249.1 LPLAT_LPCAT1-like 140..377 CDD:153253 58/195 (30%)

Return to query results.
Submit another query.