DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpat4 and LPAT4

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_565098.1 Gene:LPAT4 / 843840 AraportID:AT1G75020 Length:378 Species:Arabidopsis thaliana


Alignment Length:191 Identity:43/191 - (22%)
Similarity:69/191 - (36%) Gaps:55/191 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 KVLGMCFGV-------LSSAISAVITYHNEDNRP--SSGICVANHTSPIDVLVLMCDSTYSLIGQ 354
            ||:.:.||:       |...::......:.|..|  ...:.:|||.:.:|.:.|.      .|..
plant    61 KVVSLIFGLWLALWPYLFETVNGTTVVFSGDIIPVEKRVLLIANHRTEVDWMYLW------NIAL 119

  Fly   355 RHG--GFLG-VLQRALARASPHIW---------FERGEAKDRHLVAERLKQHVSDPNNPP-ILIF 406
            |.|  |::. ||:.:|.:.....|         .||....|..::.:.|.. ..||..|. :.:|
plant   120 RKGCLGYIKYVLKSSLMKLPIFGWGFHVLEFIPVERKREVDEPVLLQMLSS-FKDPQEPLWLALF 183

  Fly   407 PEGTCINNTSVMQFKKGSFEVG---------------GV-----------IYPVAIKYDPR 441
            ||||........:.:|.:.|||               ||           :|.:.|.|.||
plant   184 PEGTDFTEEKCKRSQKFAAEVGLPALSNVLLPKTRGFGVCLEVLHNSLDAVYDLTIAYKPR 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 39/183 (21%)
LPAT4NP_565098.1 PLN02510 7..378 CDD:178126 43/191 (23%)

Return to query results.
Submit another query.