DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and Tmem68

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_082373.1 Gene:Tmem68 / 72098 MGIID:1919348 Length:329 Species:Mus musculus


Alignment Length:207 Identity:42/207 - (20%)
Similarity:74/207 - (35%) Gaps:50/207 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLQCHQLIIFICSGACAFKPSHGQRIVAGSNVSPHNKYPWIALLTYLDSPS---GQGSLINDRTI 64
            |||.....:.:...|.|.:..|....:.||..|.:    |:..|..|..|.   ..|.:||...:
Mouse  1521 LLQMELERLIVKENATAVQKQHQATDLRGSGSSSN----WLKKLCKLSLPEYTLDFGFVINGNIV 1581

  Fly    65 VTTATIVESMPVIVHIRALLGVYNRTDASESITSNEISTALAHPGYKTKN---QF---ADNIG-- 121
            .....|..:.|:.|..:|     ||:..:.:..|.|:......|..:|:.   :|   ..|:|  
Mouse  1582 THIVKITNTCPLAVSFKA-----NRSSLAGTGFSTELDRVQGLPFCETETFEVKFDTRGANLGKI 1641

  Fly   122 -----LLILKDPLTSFQPICLPVAIPESLPAPKATVVGWGASYPNGPLAEVLQETELQMHA--PS 179
                 :.::|.|....: :|..|.:| ||.....|                     ||.|.  ..
Mouse  1642 NAVMPIQVMKGPQVQVR-LCAEVTMP-SLTVSTDT---------------------LQFHTIQCG 1683

  Fly   180 ICQTVSSQVSSN 191
            :|:.::.|:.::
Mouse  1684 LCEVITIQLHND 1695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253
Tmem68NP_082373.1 LPLAT_MGAT-like 103..309 CDD:153249
Blue background indicates that the domain is not in the aligned region.

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