DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and Aup1

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001073368.1 Gene:Aup1 / 680423 RGDID:1591777 Length:410 Species:Rattus norvegicus


Alignment Length:261 Identity:62/261 - (23%)
Similarity:109/261 - (41%) Gaps:52/261 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 SPLDVAILSTDCTYSLVVWLTVCTAAVGYLKDGPFKRDLVHKVLGMCFGVLSSAISAVITYHNE- 321
            :|:.:.:|.......|.|:|..|.     |.|...:|.:|..   ||      |:..::....: 
  Rat    32 APVGLCLLVLRLFLGLHVFLVSCA-----LPDSVLRRFVVRT---MC------AVLGLVARQEDS 82

  Fly   322 ---DNRPSSGICVANHTSPIDVLVLMCDSTYSLIGQRHGGFLGVLQRALARASP-HIWFERG--E 380
               |:|..  :.::||.:|.|         ::::     ..|......|..:.| .:.:.||  |
  Rat    83 GLRDHRVR--VLISNHVTPFD---------HNIV-----NLLTTCSTPLLNSPPSFVCWSRGFME 131

  Fly   381 AKDRHLVAERLKQHVSDPNNP--PILIFPEGTCIN-NTSVMQFKKGSFEVGGVIYPVAIK----- 437
            ...|..:.|.||:..:....|  |:|:|||....| ...:::|....|.:..|:.|:.::     
  Rat   132 MDRRVELVESLKKFCASTRLPPTPLLLFPEEEATNGREGLLRFSSWPFSIQDVVQPLTLQVQRPL 196

  Fly   438 YDPRFGDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMYRQEGESAIDFANRVKSVIAKQGGL 502
            ......||.|.|   .::..|::..|    |..|.:|.|:.||.||...:||.||:.::||:.|.
  Rat   197 VSVTVSDASWVS---ELLWSLFVPFT----VYQVRWLHPIRRQLGEENEEFALRVQQLVAKELGQ 254

  Fly   503 I 503
            |
  Rat   255 I 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 50/212 (24%)
Aup1NP_001073368.1 LPLAT 66..264 CDD:473073 53/222 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..293
CUE_AUP1 300..340 CDD:270603
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..367
Blue background indicates that the domain is not in the aligned region.

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