DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and Lpgat1

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001102846.1 Gene:Lpgat1 / 679692 RGDID:1585897 Length:370 Species:Rattus norvegicus


Alignment Length:228 Identity:53/228 - (23%)
Similarity:85/228 - (37%) Gaps:70/228 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 FCVANHTSPLDVAILSTDCTYSLVVWLTVCTAAVGYLKDGPFKRDLVHK-VLGMCFGVLSSAISA 314
            |.|||:.    |||.|..|...::..|.|..:...:..:|     |::| :|||   |.|....|
  Rat    24 FMVANNL----VAIPSYICYIIILQPLRVLDSKRFWYIEG-----LMYKWLLGM---VASWGWYA 76

  Fly   315 --VITYHNEDNR---PSSGICVANHTSPIDVLVL-MC--------------------DSTYSLIG 353
              .:....||.:   ....:.:.||.:..||..| ||                    .:.:.::.
  Rat    77 GYTVMEWGEDIKAIAKDEAVMLVNHQATGDVCTLMMCLQDKGPVVAQMMWLMDHIFKYTNFGIVS 141

  Fly   354 QRHGGFLGVLQRALARASPHIWFERGEA-KDRHLVAERLKQHVS----DPNNPPILIFPEGTCI- 412
            ..||.|               :..:|.| :|:.|:.  ||:|:.    ..:...|::||||..: 
  Rat   142 LIHGDF---------------FIRQGRAYRDQQLLV--LKKHLEHNYRSRDRKWIVLFPEGGFLR 189

  Fly   413 --NNTSVMQFKKGSFEVGGVIYPVAIKYDPRFG 443
              ..||....||.:..   .:..|.:   ||||
  Rat   190 KRRETSQAFAKKNNLP---FLTHVTL---PRFG 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 36/171 (21%)
Lpgat1NP_001102846.1 LPLAT_LCLAT1-like 69..285 CDD:153252 36/171 (21%)
Acyltransf_C 274..344 CDD:465006
Blue background indicates that the domain is not in the aligned region.

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