DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpat4 and agpat9l

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001092920.1 Gene:agpat9l / 567414 ZFINID:ZDB-GENE-060531-19 Length:443 Species:Danio rerio


Alignment Length:540 Identity:223/540 - (41%)
Similarity:305/540 - (56%) Gaps:109/540 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AVLLDIFWIPIGGFLSFLIFISAINKSIGVRKAYVNLLLRIFEYGRVSIETASKENQHIQNPKTD 67
            |||..:..:.....:..::..:....|:|:.:.|:.||::..|:....|:.||:..:.::     
Zfish     6 AVLFPVLKVWFSCVIVLIMLPAMFGISLGITETYMKLLIKTLEWATHRIQRASRAEEILK----- 65

  Fly    68 DKQGVQLVDDADSKEGTNGATLITRDAVLLPQP-QEPAPEKPVSSTKDEINFDFEKCLDYVKSGV 131
                         :..:||  ||.||...|.|. :|....:|.|:  |..:|.....|.:.:.|.
Zfish    66 -------------ESASNG--LIQRDNSSLEQEIEELRRNRPKSA--DRGDFTLSDVLYFSRKGF 113

  Fly   132 EAIIEDDVTSRFEAEELKSWNMLTRTNRHYEFISWKITSIWVFGFFIRYVILMPLRVLVCFVGVL 196
            |:|:|||||.||.:|||.|||:|||||.::::||.::|.:||.|..:||.||:|||:.:..:|  
Zfish   114 ESIVEDDVTQRFTSEELVSWNLLTRTNNNFQYISLRLTVLWVVGVVVRYCILLPLRITLTTIG-- 176

  Fly   197 FAVLSSSIVACLPFRFVRLSLASLSFKITFRLISSSMSSFIKFHNKQYKPTVSGFCVANHTSPLD 261
                                                                             
Zfish   177 ----------------------------------------------------------------- 176

  Fly   262 VAILSTDCTYSLVVWLTVCTAAVGYLKDGPFKR---DLVHKVLGMCFGVLSSAISAVITYHNEDN 323
                        :.||.:.|..||:|.:...|.   :|||.   ||:.:.:..:||.|.:||:.|
Zfish   177 ------------LTWLVIGTTTVGFLPNCRVKNWLSELVHL---MCYRICARGLSATIHFHNKQN 226

  Fly   324 RP-SSGICVANHTSPIDVLVLMCDSTYSLIGQRHGGFLGVLQRALARASPHIWFERGEAKDRHLV 387
            || ..|||||||||||||::|..|..|:::||.|||.:||||||:.|:.|||||||.|.:|||||
Zfish   227 RPKKGGICVANHTSPIDVVILANDGCYAMVGQVHGGLMGVLQRAMERSCPHIWFERSEMRDRHLV 291

  Fly   388 AERLKQHVSDPNNPPILIFPEGTCINNTSVMQFKKGSFEVGGVIYPVAIKYDPRFGDAFWNSAKY 452
            .:|||.||:.....|||||||||||||||||.|||||||:||.||||||||||:||||||||:||
Zfish   292 TQRLKDHVNAKTKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIYPVAIKYDPQFGDAFWNSSKY 356

  Fly   453 SMMQYLYMMMTSWAIVCDVWYLPPMYRQEGESAIDFANRVKSVIAKQGGLIDLVWDGQLKRMKPK 517
            |:|.||..|||||||||:|||||||..:|||.|:.|||||||.||:||||:||.|||.|||.|.|
Zfish   357 SIMSYLLRMMTSWAIVCNVWYLPPMTHEEGEDAVQFANRVKSTIAQQGGLVDLAWDGGLKRAKVK 421

  Fly   518 KEWREIQQVEFANRLKSDST 537
            ..::|.||.::::.:..:.:
Zfish   422 DSFKEQQQKKYSHMVVGEDS 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 143/206 (69%)
agpat9lNP_001092920.1 LPLAT_LPCAT1-like 208..417 CDD:153253 143/208 (69%)
HXXXXD motif 238..243 4/4 (100%)

Return to query results.
Submit another query.