DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and Lpcat1

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001094205.1 Gene:Lpcat1 / 361467 RGDID:1311599 Length:534 Species:Rattus norvegicus


Alignment Length:248 Identity:56/248 - (22%)
Similarity:105/248 - (42%) Gaps:58/248 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 ICVANHTSPIDVL-VLMCDSTYSLIGQRHGGFLGVLQRALARASPHIW-----------FERGEA 381
            :.:|.|:|..|.: |.|..|:             ::.:|.:|..| ||           ..|.:.
  Rat   130 LTLAPHSSYFDAIPVTMTMSS-------------IVMKAESRDIP-IWGTLIRYIRPVFVSRSDQ 180

  Fly   382 KDRHLVAERLKQHV-SDPNNPPILIFPEGTCINNTSVMQFKKGSFEVGGVIYPVAIKYDPRFGDA 445
            ..|....|.:|:.. |:...|.|:|||||||.|.|.::.||.|:|..|..:.||.::|..:....
  Rat   181 DSRRKTVEEIKRRAQSNGKWPQIMIFPEGTCTNRTCLITFKPGAFIPGVPVQPVVLRYPNKLDTI 245

  Fly   446 FWNSAKYSMMQYLYMMMTSWAIVCDVWYLP---PMYRQEGESAIDFANRVKSVIAKQGG--LIDL 505
            .|.......::.|::.:..:....::.:||   |...::...|: :|:.|:.|:||..|  :.|.
  Rat   246 TWTWQGPGALKILWLTLCQFQNQVEIEFLPVYCPSEEEKRNPAL-YASNVRRVMAKALGVSVTDY 309

  Fly   506 VW--------DGQLK-----------------RMKPKKEWREIQQVEFANRLK 533
            .:        :|||:                 .:||:...:::.:...:.|:|
  Rat   310 TFEDCQLALAEGQLRLPADTCLLEFARLVRGLGLKPENLEKDLDKYSESARMK 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 52/226 (23%)
Lpcat1NP_001094205.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
LPLAT_LPCAT1-like 103..314 CDD:153253 49/198 (25%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 135..140 2/4 (50%)
EFh <350..412 CDD:415501 2/13 (15%)
EFh 384..446 CDD:415501
EF-hand_7 421..480 CDD:463900
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 531..534
Blue background indicates that the domain is not in the aligned region.

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