DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and lpcat4

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_991122.2 Gene:lpcat4 / 327566 ZFINID:ZDB-GENE-030131-5777 Length:508 Species:Danio rerio


Alignment Length:349 Identity:74/349 - (21%)
Similarity:127/349 - (36%) Gaps:104/349 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 VILMPLRVLVCFVGVLFAVLSSSIVACLPFRFVRLSLASLSFKITFRLISSSMSSFIK------F 239
            |.|.|:|:.   :.|||.:|...|        .||.||.|.        .|..:..::      |
Zfish    31 VFLFPVRIT---LAVLFFLLMWPI--------ARLRLAGLP--------ESRRAEPVRGWRRWLF 76

  Fly   240 HNKQ-YKPTVSGFCVANHTSPLDVAILSTDCTYSLVVWLTVCTAAVGYLKDGPFKRDLVHKVLGM 303
            |:.. :......|||.                   .:|:.|.....| ||:.|.           
Zfish    77 HHVMVFLSRAVFFCVG-------------------FLWVRVKGRQAG-LKEAPV----------- 110

  Fly   304 CFGVLSSAISAVITYHNEDNRPSSGICVANHTSPIDVLVLMCDSTYSLIGQRHGGFLGVLQRALA 368
                                     :.||.|:|.:|:|||.......::.:.....|.|: .||.
Zfish   111 -------------------------LAVAPHSSFLDMLVLSVTGLPIVVSRSENAKLPVI-GALL 149

  Fly   369 RASPHIWFERGEAKDRHLVAERLKQHV-SDPNNPPILIFPEGTCINNTSVMQFKKGSFEVGGVIY 432
            ..:..:...|.:.:.|.....::.:.| ||.:.|.:|:|||||..|..::::||.|:|..|..:.
Zfish   150 EFNQSVLVSRKDPESRKKCVSQICERVTSDGHWPQMLMFPEGTTTNGRALIKFKPGAFVAGVPVQ 214

  Fly   433 PVAIKYDPR-------FGDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMYRQEGESAID--- 487
            ||.:.|..:       :....|..|.:.....:|..:|       |.:| |:|....|...:   
Zfish   215 PVLLHYCSQPDTVRWTWKGLSWLGALWHTTSQIYSSIT-------VEFL-PVYTPSAEEKQNPEL 271

  Fly   488 FANRVKSVIAKQGGL--IDLVWDG 509
            :|..|:.::|:..|:  .|.:.:|
Zfish   272 YAENVQKLMARALGVPATDYMMEG 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 48/216 (22%)
lpcat4NP_991122.2 LPLAT_LPCAT1-like 85..291 CDD:153253 55/270 (20%)
FRQ1 335..442 CDD:444056
Blue background indicates that the domain is not in the aligned region.

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