DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and aup1

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_005173140.1 Gene:aup1 / 324654 ZFINID:ZDB-GENE-030131-3375 Length:429 Species:Danio rerio


Alignment Length:274 Identity:65/274 - (23%)
Similarity:114/274 - (41%) Gaps:61/274 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 YKPTVSGFCVANHTSPLDVAILSTDCTYSLVVWLTVCTAAVGYLKDGPFKRDLVHKVLGMCFGVL 308
            |.|.  |||:......:.|.:....|.                |.|...:|.:|..   ||    
Zfish    28 YAPV--GFCLMLLRIFIGVHVFLVSCA----------------LPDSIVRRFIVRI---MC---- 67

  Fly   309 SSAISAVITYHNEDNRP-----SSGICVANHTSPID--VLVLMCDSTYSLIGQRHGGFLGVLQRA 366
                 :|:..|.:.|.|     ::.:.|.||.:..|  ::.|:......|: :...|||     .
Zfish    68 -----SVLGLHVQQNSPRLRDKTTRLYVCNHVTHFDHNIINLLTSCNTPLL-EGPVGFL-----C 121

  Fly   367 LARASPHIWFERGE-AKDRHLVAERLKQHVSDPNNPPILIFPEGTCIN-NTSVMQFKKGSFEVGG 429
            .||.    :.|.|: ...|..:.|.|.::.|.|:..|:|:|||....| .|.:::|....|.|..
Zfish   122 WARG----FMELGQGVGSRTELTETLHRYCSSPDTLPLLLFPEEDTTNGRTGLLKFSSWPFSVSD 182

  Fly   430 VIYPVAIKYDPRF-----GDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMYRQEGESAIDFA 489
            .|.|||:.....|     .::.|      :.:.|:.....:. |..|.:|||:.:::||:..:||
Zfish   183 SIQPVALLVKRPFIAVSTPESSW------LTELLWTFFVPFT-VYHVRWLPPLSKEDGETHQEFA 240

  Fly   490 NRVKSVIAKQGGLI 503
            ::|:.::|.:.|:|
Zfish   241 SKVQGLLATELGVI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 52/211 (25%)
aup1XP_005173140.1 LPLAT 63..263 CDD:473073 55/221 (25%)
CUE_AUP1 310..354 CDD:270603
Blue background indicates that the domain is not in the aligned region.

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