DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpat4 and LPCAT

DIOPT Version :10

Sequence 1:NP_001286818.1 Gene:Gpat4 / 37852 FlyBaseID:FBgn0034971 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001036265.1 Gene:LPCAT / 31899 FlyBaseID:FBgn0052699 Length:533 Species:Drosophila melanogaster


Alignment Length:389 Identity:87/389 - (22%)
Similarity:167/389 - (42%) Gaps:92/389 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SGVEAIIED-----DVTSRFEAEELKSWNMLTRTNRHYEFISWKI------TSIWVFGFFIRYVI 182
            :||...:.|     .:|.|...|:  :|     .::.|.:|:..:      :.|.|...::..|:
  Fly    17 AGVVGNVADVGVAASLTKRDSEED--TW-----ASKGYNYINPFVHRIEIDSHIEVAKIYVLTVL 74

  Fly   183 LMPLRVLVCFVGVLFAVLSSSIVACLPFRFVRLSLASLSFKITFRLISSSMSSFIKFHNKQYKPT 247
            |:|:||    ||.:.:::|:.:.||:  ....::|..|..|        .::.:.|  ..||   
  Fly    75 LLPIRV----VGCVLSLISAWMFACI--GLYGMTLDDLKAK--------PLTGWRK--QMQY--- 120

  Fly   248 VSGFCVANHTSPLDVAILSTDCTYSLVVWLTVCTAAVGYLKDGPFKRDLVHKVLGMCFGVLSSAI 312
                                         :|.|...:.| ..|.|     |.|  ...|..::|.
  Fly   121 -----------------------------MTACGMRMVY-TFGSF-----HYV--TMKGRAATAK 148

  Fly   313 SAVITYHNEDNRPSSGICVANHTSPIDVLVLMCDSTYSLIGQRHGGFLGVLQRALARASPHIWFE 377
            .|.|            :.||.|:|.:|.::::.....|::.:|....:.:|.:.:..|.| |:.:
  Fly   149 EAPI------------LVVAPHSSYVDSILVVASGPPSIVAKRETADIPLLGKIINYAQP-IYVQ 200

  Fly   378 RGEAKDR-HLVAERLKQHVSDPNNPPILIFPEGTCINNTSVMQFKKGSFEVGGVIYPVAIKYDPR 441
            |.:...| :.:.:.:.:..|..:.|.::||.||||.|.|::::||.|:|..|..:.||.:||..:
  Fly   201 REDPNSRQNTIRDIVDRARSTDDWPQVVIFAEGTCTNRTALIKFKPGAFYPGVPVQPVLLKYPNK 265

  Fly   442 FGDAFWNSAKYSMMQYLYMMMTSWAIVCDVWYLPPMYRQEGESAID---FANRVKSVIAKQGGL 502
            :....|......:::.|::.||.:...|::.|| |:|....:...|   :||.|:.|:||..|:
  Fly   266 YDTFTWTWDGPGVLRLLWLTMTQFYNRCEIEYL-PVYTPSEDEVADANLYANNVREVMAKALGV 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpat4NP_001286818.1 LPLAT_LPCAT1-like 307..513 CDD:153253 52/200 (26%)
LPCATNP_001036265.1 LPLAT_LPCAT1-like 126..338 CDD:153253 58/225 (26%)
FRQ1 401..>505 CDD:444056
EF-hand_8 455..507 CDD:404678
Blue background indicates that the domain is not in the aligned region.

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