DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yki and TRIP12

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_024308991.1 Gene:TRIP12 / 9320 HGNCID:12306 Length:2092 Species:Homo sapiens


Alignment Length:344 Identity:63/344 - (18%)
Similarity:124/344 - (36%) Gaps:90/344 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SNTNSLIEKEIDDEDMLS----------PIKSNNLVVRVNQDTDDNLQALFDSVLNPGDAKRPLQ 86
            |:::::|..:.:|.|..:          |.|.|:..|:.:...|      ::...:|..||:|..
Human    78 SSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASPD------YNRTNSPSSAKKPKA 136

  Fly    87 L-----PLRMRKLPNS------------FFTPPAPSHSRANSADSTYDAGSQSSINIGNKASIVQ 134
            |     |....| |:|            ..:..:||.|:|::..|....||:|......::|.|:
Human   137 LQHTESPSETNK-PHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKSGATGGSRSQKRKRTESSCVK 200

  Fly   135 QPDGQSPIAAIPQLQIQPSPQHSRLAIHHSRARSSPASLQQNYNVRARSDAAAANNPNANPSSQQ 199
            ...|.....|           ..|.|.....|..|..|.:...:....|.:||:.:.:::..:  
Human   201 SGSGSESTGA-----------EERSAKPTKLASKSATSAKAGCSTITDSSSAASTSSSSSAVA-- 252

  Fly   200 QPAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMSMQTVHKKQRS-------YD---VI 254
                     :::...|.||......|.:......|...|...::..:|::|       :|   ..
Human   253 ---------SASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSSKFDWAARF 308

  Fly   255 SP-IQLNRQLGALPPGWEQAKTN-------DGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERI 311
            || :.|.:...:| ||..:::|:       ..::..|..:||......|               .
Human   309 SPKVSLPKTKLSL-PGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPP---------------A 357

  Fly   312 KQNDVLQTTKQTTTSTIAN 330
            :...:.::|:|.||.:.|:
Human   358 ELPSLRRSTRQKTTGSCAS 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 13/77 (17%)
WW 266..295 CDD:395320 7/35 (20%)
WW 335..364 CDD:395320
TRIP12XP_024308991.1 SR-25 99..>233 CDD:313680 31/151 (21%)
Arm_3 489..>714 CDD:330530
WWE 808..874 CDD:308464
HECTc 1690..2090 CDD:238033
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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