DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and RSP5

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_011051.3 Gene:RSP5 / 856862 SGDID:S000000927 Length:809 Species:Saccharomyces cerevisiae


Alignment Length:503 Identity:113/503 - (22%)
Similarity:181/503 - (35%) Gaps:151/503 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FRLYTISAFYMLTTMSASS---------------NTNSLIEKEIDDEDMLSPIKSNNLVVRVNQD 63
            |.:.||..:...:|.:|..               |.||::..::.|:..... |....:..||..
Yeast    27 FAVLTIDGYQTKSTSAAKKTLNPYWNETFKFDDINENSILTIQVFDQKKFKK-KDQGFLGVVNVR 90

  Fly    64 TDDNLQAL-FDSVLNPG---------DAKRPL-------QLPLRMRKLPNSFFTPPAPSHSRANS 111
            ..|.|..| .|:..:.|         |.|:..       :|.:.:.|||:|.....|||...|:|
Yeast    91 VGDVLGHLDEDTATSSGRPREETITRDLKKSNDGMAVSGRLIVVLSKLPSSSPHSQAPSGHTASS 155

  Fly   112 ADSTYDAGSQSSINIGNKASIVQQPDGQSPIAAIPQ-----LQIQPSPQHSRLAIHHSRARSSPA 171
            :.:|    |.::...|:..|..:......|.....|     ||...:...:.....|....|:.:
Yeast   156 STNT----SSTTRTNGHSTSSTRNHSTSHPSRGTAQAVESTLQSGTTAATNTATTSHRSTNSTSS 216

  Fly   172 SLQQ----------------------------NYNVRA---------RSDAAAANNPNANPS-SQ 198
            :.:|                            ::|.|.         :::|...|..|||.. .:
Yeast   217 ATRQYSSFEDQYGRLPPGWERRTDNFGRTYYVDHNTRTTTWKRPTLDQTEAERGNQLNANTELER 281

  Fly   199 QQPAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMSMQTVHKKQRSYDVISPIQLNRQL 263
            :|..|.|.|..|:.............::..:|...:.....:..|                ...|
Yeast   282 RQHRGRTLPGGSSDNSSVTVQVGGGSNIPPVNGAAAAAFAATGGT----------------TSGL 330

  Fly   264 GALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERIKQNDVLQTTKQTTTSTI 328
            |.||.||||..|.:|:.|:::|.|::|.|.||    |:||.|             .|...|.:||
Yeast   331 GELPSGWEQRFTPEGRAYFVDHNTRTTTWVDP----RRQQYI-------------RTYGPTNTTI 378

  Fly   329 ----ANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPRMQSGLSVLDCPDNLV--------- 380
                .:.|||||.|||..:|.:..:||::|..:||:|:|||:.|.|      |..|         
Yeast   379 QQQPVSQLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSL------DQNVPQYKRDFRR 437

  Fly   381 --------SSLQIEDNLC------SNLFNDA-QAIVNPPSSHKPDDLE 413
                    .:|:|....|      .|:|.|| |.|:.    ..|:||:
Yeast   438 KVIYFRSQPALRILPGQCHIKVRRKNIFEDAYQEIMR----QTPEDLK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 56/170 (33%)
WW 266..295 CDD:395320 13/28 (46%)
WW 335..364 CDD:395320 12/28 (43%)
RSP5NP_011051.3 HUL4 3..809 CDD:227354 113/503 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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