DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and Hectd3

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_780453.1 Gene:Hectd3 / 76608 MGIID:1923858 Length:861 Species:Mus musculus


Alignment Length:155 Identity:32/155 - (20%)
Similarity:59/155 - (38%) Gaps:39/155 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 TNDGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERIKQNDVLQTTKQTTTSTIAN--------- 330
            |.:..:..|..:...|.||....|.:...::.|    |:..:::....|..:|..|         
Mouse   253 TEEFNVSCLTDSNADTYWESDGSQCQHWVRLTM----KKGTIVKKLLLTVDTTDDNFMPKRVVVY 313

  Fly   331 -----NLGPLPDGWEQAVTES--GDLYFINHIDRTTSWNDPRMQSGLSVLDCPDN---------- 378
                 ||..|.|   ..:.|:  ||:..:.  |.|.  :.|.::  :.:::|.|:          
Mouse   314 GGEGDNLKKLSD---VNIDETLIGDVCVLE--DMTV--HLPIIE--IRIVECRDDGIDVRLRGVK 369

  Fly   379 LVSSLQIEDNLCSNLFNDAQAIVNP 403
            :.||.|.|..|.::||..|..:..|
Mouse   370 IKSSRQRELGLNADLFQPASLVRYP 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 32/155 (21%)
WW 266..295 CDD:395320 5/19 (26%)
WW 335..364 CDD:395320 7/30 (23%)
Hectd3NP_780453.1 APC10-HECTD3 238..371 CDD:176487 23/130 (18%)
HECTc 528..849 CDD:214523
HECT 586..845 CDD:279026
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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